RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PRAMEF33A0A0G2JMD5 474 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 IQCMA0A1B0GVH7 501 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 FABP12A6NFH5 140 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CENPBD1B2RD01 187 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ANHXE9PGG2 379 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 J3KTA2 159 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 K7ESF4 209 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 M0R129 80 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CASKO14936 926 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 KMOO15229 486 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CASC3O15234 703 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 NDUFS4O43181 175 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 VEGFDO43915 354 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 HCN1O60741 890 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TBX19O60806 448 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 PRAMEF10O60809 474 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ENTPD6O75354 484 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 KCNK2O95069 426 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SOX14O95416 240 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ETHE1O95571 254 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 GBAP04062 536 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 IL7P13232 177 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF8P17098 575 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 GABRB1P18505 474 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 DDCP20711 480 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 MAGP20916 626 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CFL1P23528 166 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ELAVL4P26378 380 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 EPHA2P29317 976 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 C21orf33P30042 268 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 HLA-FP30511 346 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TALDO1P37837 337 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 DDOSTP39656 456 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SOX3P41225 446 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SLC9A3P48764 834 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CCR8P51685 355 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CRISP3P54108 245 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CASP9P55211 416 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 WNT4P56705 351 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 RAB25P57735 213 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TAS2R41P59536 307 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TRA2BP62995 288 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 UBE3AQ05086 875 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TGM3Q08188 693 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 COX10Q12887 443 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 FOXF2Q12947 444 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 MRPL28Q13084 256 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TARDBPQ13148 414 aaKnown RBP eCLIP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 RPA4Q13156 261 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SELENBP1Q13228 472 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ASAH1Q13510 395 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 KRT33BQ14525 404 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ARHGAP19Q14CB8 494 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CARTPTQ16568 116 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 DUSP6Q16828 381 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SLC5A12Q1EHB4 618 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TBRG1Q3YBR2 411 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 GPAT3Q53EU6 434 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SOWAHCQ53LP3 525 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF362Q5T0B9 420 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ATAD3CQ5T2N8 411 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 MFSD4BQ5TF39 518 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 KHDRBS2Q5VWX1 349 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SAXO2Q658L1 398 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 C12orf73Q69YU5 71 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 FRMPD2BQ6IN97 320 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TYW3Q6IPR3 259 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CDC73Q6P1J9 531 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 HSDL2Q6YN16 418 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF852Q6ZMS4 543 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ADCK2Q7Z695 626 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 GRASPQ7Z6J2 395 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TMEM150AQ86TG1 271 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SLC9B2Q86UD5 537 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CCDC190Q86UF4 302 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 JAZF1Q86VZ6 243 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 TMC8Q8IU68 726 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 MMAAQ8IVH4 418 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 PEX5LQ8IYB4 626 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CLIP4Q8N3C7 705 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 CAMKK1Q8N5S9 505 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 GDPD1Q8N9F7 314 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 ASCC1Q8N9N2 400 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 IL17RCQ8NAC3 791 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 PROKR2Q8NFJ6 384 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 OR2A12Q8NGT7 310 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SUN3Q8TAQ9 357 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SPPL3Q8TCT6 385 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 GNPDA2Q8TDQ7 276 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 POF1BQ8WVV4 589 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 C17orf50Q8WW18 174 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 SCAMP4Q969E2 229 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 EXOSC8Q96B26 276 aaKnown RBP4.1□□□□□ -1.75
ATXN3-241ENST00000556374 OTULINQ96BN8 352 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 DTD2Q96FN9 168 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 KCTD7Q96MP8 289 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 NECTIN4Q96NY8 510 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 OPALINQ96PE5 141 aa4.1□□□□□ -1.75
ATXN3-241ENST00000556374 OR4K3Q96R72 315 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms