RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SMR3AQ99954 134 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 DUSP26Q9BV47 211 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 SFXN3Q9BWM7 321 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 FAIM2Q9BWQ8 316 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 RTN4RQ9BZR6 473 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 NANOGQ9H9S0 305 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 FOLH1BQ9HBA9 442 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 TAS2R10Q9NYW0 307 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 TAS2R7Q9NYW3 318 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 ADA2Q9NZK5 511 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 FLRT3Q9NZU0 649 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 PRODH2Q9UF12 536 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 ZNF780BQ9Y6R6 833 aa9.56□□□□□ -0.88
SHMT2-215ENST00000554656 ZANQ9Y493 2812 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 A0A1W2PNV4 684 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 SH3D21A4FU49 640 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 NME4O00746 187 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 BCAS2O75934 225 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-215ENST00000554656 PDE5AO76074 875 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 STAMBPO95630 424 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 HOXC12P31275 282 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 CCKARP32238 428 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 CLDN15P56746 228 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 PHC1P78364 1004 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 C2orf80Q0P641 193 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 FLOT2Q14254 428 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 SNCBQ16143 134 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 RUNDC3AQ59EK9 446 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 OR4F3Q6IEY1 312 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 ENPP6Q6UWR7 440 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 CXorf67Q86X51 503 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-215ENST00000554656 OR7A2PQ8NGA2 310 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 WDR60Q8WVS4 1066 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 STMN2Q93045 179 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 POP5Q969H6 163 aaKnown RBP9.55□□□□□ -0.88
SHMT2-215ENST00000554656 EFHD2Q96C19 240 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-215ENST00000554656 PPCDCQ96CD2 204 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 ZFP3Q96NJ6 502 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 DACH2Q96NX9 599 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 TM9SF2Q99805 663 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 PAIP1Q9H074 479 aaKnown RBP9.55□□□□□ -0.88
SHMT2-215ENST00000554656 RNPEPL1Q9HAU8 725 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 CMTM6Q9NX76 183 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 PSME2Q9UL46 239 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 TESMINQ9Y4I5 508 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 PRR14LQ5THK1 2151 aa9.55□□□□□ -0.88
SHMT2-215ENST00000554656 ABCA2Q9BZC7 2435 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 ROS1P08922 2347 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 PRORSD1PA6NEY8 169 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 A8MXE2 369 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 H0YC42 278 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 RFXANKO14593 260 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 ACOT8O14734 319 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 AKAP10O43572 662 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 PLOD3O60568 738 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 ABCB7O75027 752 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 GOSR1O95249 250 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 PSMG1O95456 288 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 DDCP20711 480 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 CHMP24386 653 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 TPD52P55327 224 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-215ENST00000554656 PSG6Q00889 435 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 KEAP1Q14145 624 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 PGS1Q32NB8 556 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 C6orf10Q5SRN2 563 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 FBXW10Q5XX13 1052 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 ZFP1Q6P2D0 407 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 VWA1Q6PCB0 445 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 GRAMD2AQ8IUY3 354 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 SLC44A2Q8IWA5 706 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-215ENST00000554656 FADS6Q8N9I5 356 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 OR2M3Q8NG83 312 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 TMCO6Q96DC7 493 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 SFXN2Q96NB2 322 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 YIPF4Q9BSR8 244 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 SPATA9Q9BWV2 254 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 TRIM15Q9C019 465 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 MIEF1Q9NQG6 463 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 SLC35C2Q9NQQ7 365 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 ACTR3BQ9P1U1 418 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 DKKL1Q9UK85 242 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 CORO2BQ9UQ03 480 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 MRPS18CQ9Y3D5 142 aaKnown RBP9.54□□□□□ -0.88
SHMT2-215ENST00000554656 DSCAMO60469 2012 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 TLN2Q9Y4G6 2542 aa9.54□□□□□ -0.88
SHMT2-215ENST00000554656 AQP12BA6NM10 295 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 DEFB108AA8MXU0 73 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 EVPLLA8MZ36 301 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 SCO2O43819 266 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 FADS1O60427 444 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 ENTPD5O75356 428 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 ANP32DO95626 131 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 LAMP1P11279 417 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 FOSL1P15407 271 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 DPP4P27487 766 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 IL12BP29460 328 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 EVI2BP34910 448 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 GCKP35557 465 aa9.53□□□□□ -0.88
SHMT2-215ENST00000554656 FRKP42685 505 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-215ENST00000554656 GSK3BP49841 420 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms