RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 DNAJC1Q96KC8 554 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 MARK4Q96L34 752 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF599Q96NL3 588 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 RPRD1AQ96P16 312 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 FAM234AQ9H0X4 552 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 RBM38Q9H0Z9 239 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 EBF3Q9H4W6 596 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 CLK4Q9HAZ1 481 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 NLE1Q9NVX2 485 aaPredicted RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 OR6C3Q9NZP0 311 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 IKZF3Q9UKT9 509 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 PSMD13Q9UNM6 376 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 EXO1Q9UQ84 846 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ERVK-11Q9UQG0 969 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ARL5AQ9Y689 179 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 AP4B1Q9Y6B7 739 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 BPTFQ12830 3046 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF106Q9H2Y7 1883 aaKnown RBP4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 MYOFQ9NZM1 2061 aa4.79□□□□□ -1.64
MTHFD1-206ENST00000554353 CEP192Q8TEP8 1941 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 TRAV6A0A075B6T7 132 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 TMEM202A6NGA9 273 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 HEPACAM2A8MVW5 462 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 H3BMM5 538 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 K7EQM0 130 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SMAD9O15198 467 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 KDELR3O43731 214 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 TBX19O60806 448 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 RNASEH1O60930 286 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 TRIM3O75382 744 aaPredicted RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CTAG2O75638 210 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CRTAPO75718 401 aaPredicted RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CDK14O94921 469 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CD160O95971 181 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SERPINA3P01011 423 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 LCATP04180 440 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 LYNP07948 512 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 FHP07954 510 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 PIRTP0C851 137 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 PRSS56P0CW18 603 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 G6PDP11413 515 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 TDGF1P13385 188 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 UQCRBP14927 111 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 HMGA1P17096 107 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 ANXA7P20073 488 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 GPX3P22352 226 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 DNASE1P24855 282 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CHATP28329 748 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 OR1E1P30953 314 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 ATP4BP51164 291 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SGSHP51688 502 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 PLK1P53350 603 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 AQP4P55087 323 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 PKNOX1P55347 436 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SRP54P61011 504 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 RPL26P61254 145 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 RPP38P78345 283 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 XIAPP98170 497 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 GNA12Q03113 381 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SMARCB1Q12824 385 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 ILF2Q12905 390 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SRSF5Q13243 272 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 IL18Q14116 193 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 HNF4GQ14541 408 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CYTH1Q15438 398 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 OR4D1Q15615 310 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 LPAL2Q16609 132 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 DECR1Q16698 335 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 PPP1R3AQ16821 1122 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 C2orf68Q2NKX9 166 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 C6orf141Q5SZD1 244 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 WBP2NLQ6ICG8 309 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 TMEM211Q6ICI0 200 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 OR7E24Q6IFN5 339 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF425Q6IV72 752 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 FAM45BPQ6NSW5 357 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 LINGO2Q7L985 606 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SHFQ7M4L6 423 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 FUNDC1Q8IVP5 155 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 NKAIN4Q8IVV8 208 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 APLFQ8IW19 511 aaPredicted RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 OR9A1PQ8NGU1 263 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 OR4L1Q8NH43 312 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CLHC1Q8NHS4 586 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 B4GALNT2Q8NHY0 566 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 FAM45AQ8TCE6 357 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 C2orf15Q8WU43 125 aaKnown RBP4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SPDL1Q96EA4 605 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 DTD2Q96FN9 168 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 CDKN2AIPNLQ96HQ2 116 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SLC41A2Q96JW4 573 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 C3orf30Q96M34 536 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 TMEM68Q96MH6 324 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 QRFPRQ96P65 431 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 LRRC3BQ96PB8 259 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SMIM14Q96QK8 99 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 ZNF607Q96SK3 696 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 ATOH8Q96SQ7 321 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SERPINI1Q99574 410 aa4.78□□□□□ -1.64
MTHFD1-206ENST00000554353 SEPT5Q99719 369 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms