RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 AURKBQ96GD4 344 aaPredicted RBP18.35■□□□□ 0.53
FOXA1-203ENST00000553751 ZFP3Q96NJ6 502 aa18.35■□□□□ 0.53
FOXA1-203ENST00000553751 TRNT1Q96Q11 434 aaKnown RBP18.35■□□□□ 0.53
FOXA1-203ENST00000553751 SIKE1Q9BRV8 207 aa18.35■□□□□ 0.53
FOXA1-203ENST00000553751 TRIM8Q9BZR9 551 aa18.35■□□□□ 0.53
FOXA1-203ENST00000553751 PAIP1Q9H074 479 aaKnown RBP18.35■□□□□ 0.53
FOXA1-203ENST00000553751 TPT1P8Q9HAU6 139 aa18.35■□□□□ 0.53
FOXA1-203ENST00000553751 TMEM45AQ9NWC5 275 aa18.35■□□□□ 0.53
FOXA1-203ENST00000553751 CCDC167Q9P0B6 97 aa18.35■□□□□ 0.53
FOXA1-203ENST00000553751 DCTN4Q9UJW0 460 aa18.35■□□□□ 0.53
FOXA1-203ENST00000553751 LIPT1Q9Y234 373 aa18.35■□□□□ 0.53
FOXA1-203ENST00000553751 FBN2P35556 2912 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 CACNA1DQ01668 2161 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 NR5A2O00482 541 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 RCBTB2O95199 551 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 NUDT14O95848 222 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 TMIGD3P0DMS9 266 aaPredicted RBP18.34■□□□□ 0.53
FOXA1-203ENST00000553751 CD1EP15812 388 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 CAPN3P20807 821 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 CTSSP25774 331 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 FOXF2Q12947 444 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 FGFBP1Q14512 234 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 MAPK11Q15759 364 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 TOMM34Q15785 309 aaPredicted RBP18.34■□□□□ 0.53
FOXA1-203ENST00000553751 MEX3BQ6ZN04 569 aaKnown RBP18.34■□□□□ 0.53
FOXA1-203ENST00000553751 ARFGAP2Q8N6H7 521 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 TMCO5AQ8N6Q1 288 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 FAM71CQ8NEG0 241 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 ZG16BQ96DA0 208 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 SPDL1Q96EA4 605 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 QRSL1Q9H0R6 528 aaKnown RBP18.34■□□□□ 0.53
FOXA1-203ENST00000553751 SLC38A1Q9H2H9 487 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 ZNF385DQ9H6B1 395 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 RUBCNLQ9H714 662 aa18.34■□□□□ 0.53
FOXA1-203ENST00000553751 SLC22A20A6NK97 555 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 ETV2O00321 342 aaPredicted RBP18.33■□□□□ 0.52
FOXA1-203ENST00000553751 DNAJA2O60884 412 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 BCAS1O75363 584 aaPredicted RBP18.33■□□□□ 0.52
FOXA1-203ENST00000553751 IL18BPO95998 194 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 CSTAP01040 98 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 PRKCAP17252 672 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 IL11P20809 199 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 ELK4P28324 431 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 EIF1P41567 113 aaKnown RBP18.33■□□□□ 0.52
FOXA1-203ENST00000553751 AGFG1P52594 562 aaKnown RBP18.33■□□□□ 0.52
FOXA1-203ENST00000553751 RAC1P63000 192 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 PLAURQ03405 335 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 CTU2Q2VPK5 515 aaKnown RBP18.33■□□□□ 0.52
FOXA1-203ENST00000553751 HSP90B2PQ58FF3 399 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 LRRC74BQ6ZQY2 392 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 EIF3MQ7L2H7 374 aaKnown RBP18.33■□□□□ 0.52
FOXA1-203ENST00000553751 CHMP1BQ7LBR1 199 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 HMGN2P46Q86SG4 172 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 MCEMP1Q8IX19 187 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 GCNT2Q8N0V5 402 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 TOR1AIP2Q8NFQ8 470 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 OR5W2Q8NH69 310 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 FIG4Q92562 907 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 INTS12Q96CB8 462 aaKnown RBP18.33■□□□□ 0.52
FOXA1-203ENST00000553751 ZNF845Q96IR2 970 aaPredicted RBP18.33■□□□□ 0.52
FOXA1-203ENST00000553751 ADGRG7Q96K78 797 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 SFXN3Q9BWM7 321 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 PINK1Q9BXM7 581 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 LAT2Q9GZY6 243 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 TMEM185BQ9H7F4 350 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 MED4Q9NPJ6 270 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 PCDHB14Q9Y5E9 798 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 GPC6Q9Y625 555 aaPredicted RBP18.33■□□□□ 0.52
FOXA1-203ENST00000553751 APCP25054 2843 aa18.33■□□□□ 0.52
FOXA1-203ENST00000553751 ANKHD1Q8IWZ3 2542 aaKnown RBP18.32■□□□□ 0.52
FOXA1-203ENST00000553751 MED12LQ86YW9 2145 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 DCHS2Q6V1P9 2916 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 A0A096LPI6 279 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 A0A0G2JND7 137 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 EIF1AYO14602 144 aaKnown RBP18.32■□□□□ 0.52
FOXA1-203ENST00000553751 NTN1O95631 604 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 UBTFL6P0CB48 400 aaPredicted RBP18.32■□□□□ 0.52
FOXA1-203ENST00000553751 ETFAP13804 333 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 OPRM1P35372 400 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 PGM1P36871 562 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 CRATP43155 626 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 ASCL1P50553 236 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 CCR4P51679 360 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 RPS3AP61247 264 aaKnown RBP18.32■□□□□ 0.52
FOXA1-203ENST00000553751 CBFBQ13951 182 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 AGKQ53H12 422 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 LRIF1Q5T3J3 769 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 MSRB3Q8IXL7 192 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 FBXO27Q8NI29 283 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 SLC25A37Q9NYZ2 338 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 STOML1Q9UBI4 398 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 P2RX2Q9UBL9 471 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 SLC35A3Q9Y2D2 325 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 ZNF175Q9Y473 711 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 HEATR5AQ86XA9 2040 aa18.32■□□□□ 0.52
FOXA1-203ENST00000553751 AGAP5A6NIR3 686 aa18.31■□□□□ 0.52
FOXA1-203ENST00000553751 ADAMDEC1O15204 470 aa18.31■□□□□ 0.52
FOXA1-203ENST00000553751 EFNA2O43921 213 aa18.31■□□□□ 0.52
FOXA1-203ENST00000553751 OPN1LWP04000 364 aa18.31■□□□□ 0.52
FOXA1-203ENST00000553751 NR2F1P10589 423 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms