RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 ZNF836Q6ZNA1 936 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 HDDC2Q7Z4H3 204 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 RANBP3LQ86VV4 465 aaPredicted RBP16.3■□□□□ 0.2
SYNE3-202ENST00000553340 MS4A15Q8N5U1 240 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 BMPERQ8N8U9 685 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 TEX19Q8NA77 164 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 BEST4Q8NFU0 473 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 PTP4A1Q93096 173 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 ARMC5Q96C12 935 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 RADILQ96JH8 1075 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 ENKD1Q9H0I2 346 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 OR51V1Q9H2C8 321 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 DLL4Q9NR61 685 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 ACSL5Q9ULC5 683 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 NUMA1Q14980 2115 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 SCO1O75880 301 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 MRPL3P09001 348 aaKnown RBP16.3■□□□□ 0.2
SYNE3-202ENST00000553340 HOXB3P14651 431 aaPredicted RBP16.3■□□□□ 0.2
SYNE3-202ENST00000553340 SSTR2P30874 369 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 SNTB2Q13425 540 aaKnown RBP16.3■□□□□ 0.2
SYNE3-202ENST00000553340 CEBPEQ15744 281 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 ZNF687Q8N1G0 1237 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 SRFBP1Q8NEF9 429 aaKnown RBP16.3■□□□□ 0.2
SYNE3-202ENST00000553340 OR56B4Q8NH76 319 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 CDS1Q92903 461 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 PGLYRP3Q96LB9 341 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 PRSS27Q9BQR3 290 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 CMC2Q9NRP2 79 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 ABRACLQ9P1F3 81 aa16.3■□□□□ 0.2
SYNE3-202ENST00000553340 RPS10-NUDT3A0A1W2PQS6 291 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 CIB4A0PJX0 185 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 TRAPPC13A5PLN9 417 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 PRRT4C9JH25 899 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 AGR2O95994 175 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 CAPZA2P47755 286 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 RAB14P61106 215 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 COL9A2Q14055 689 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-202ENST00000553340 EIPR1Q53HC9 387 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 TCEAL5Q5H9L2 206 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 RPTNQ6XPR3 784 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 RNF113BQ8IZP6 322 aaKnown RBP16.29■□□□□ 0.2
SYNE3-202ENST00000553340 VWCEQ96DN2 955 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 INSM2Q96T92 566 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-202ENST00000553340 IFT27Q9BW83 186 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 SPRTNQ9H040 489 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-202ENST00000553340 ZNF223Q9UK11 482 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-202ENST00000553340 STX11O75558 287 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 RCBTB2O95199 551 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 MPC2O95563 127 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 SBK2P0C263 348 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 SAGP10523 405 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-202ENST00000553340 ZNF250P15622 560 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 MAKP20794 623 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 ZNF136P52737 540 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 NRG3P56975 720 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 OR12D2P58182 307 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 FOXK2Q01167 660 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 DBPQ10586 325 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-202ENST00000553340 MLF2Q15773 248 aaPredicted RBP16.29■□□□□ 0.2
SYNE3-202ENST00000553340 MFSD12Q6NUT3 480 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 RPL13AP3Q6NVV1 102 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 CMIPQ8IY22 773 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 SLAIN1Q8ND83 568 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 HAVCR2Q8TDQ0 301 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 GHSRQ92847 366 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 MS4A3Q96HJ5 214 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 GSDMCQ9BYG8 508 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 SLC27A6Q9Y2P4 619 aa16.29■□□□□ 0.2
SYNE3-202ENST00000553340 TRABD2BA6NFA1 517 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 ZNF593O00488 134 aaPredicted RBP16.28■□□□□ 0.2
SYNE3-202ENST00000553340 MT-ND4P03905 459 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 SNRPBP14678 240 aaKnown RBP16.28■□□□□ 0.2
SYNE3-202ENST00000553340 CLDN2P57739 230 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 RIPPLY1Q0D2K3 151 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 MESP2Q0VG99 397 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 DMKNQ6E0U4 476 aaPredicted RBP16.28■□□□□ 0.2
SYNE3-202ENST00000553340 FAM111BQ6SJ93 734 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 BAIAP2L2Q6UXY1 529 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 RTL4Q6ZR62 310 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 ASPGQ86U10 573 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 TMEM239Q8WW34 195 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 MSANTD3Q96H12 275 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 MS4A4EQ96PG1 132 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 BRD7Q9NPI1 651 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 KLF15Q9UIH9 416 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 CAMK2AQ9UQM7 478 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 TBC1D3KA0A087X1G2 549 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 TRAV1-2A0A0B4J238 106 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 ABHD14A-ACY1A0A1B0GW23 586 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 CDHR4A6H8M9 788 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 TBC1D3BA6NDS4 549 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 TBC1D3FA6NER0 549 aaPredicted RBP16.28■□□□□ 0.2
SYNE3-202ENST00000553340 SERPINA3P01011 423 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 PRG2P13727 222 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 ATF1P18846 271 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 PYCR1P32322 319 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 TSFMP43897 325 aaKnown RBP16.28■□□□□ 0.2
SYNE3-202ENST00000553340 ZNF85Q03923 595 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 DYRK1AQ13627 763 aa16.28■□□□□ 0.2
SYNE3-202ENST00000553340 AANATQ16613 207 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms