RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 C17orf47Q8NEP4 570 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 TRPV1Q8NER1 839 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 OR2T33Q8NG76 320 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 OR5L2Q8NGL0 311 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 OR6T1Q8NGN1 323 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 SCFD1Q8WVM8 642 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 TRUB1Q8WWH5 349 aaKnown RBP3.97□□□□□ -1.77
SCFD1-209ENST00000553280 CCDC77Q9BR77 488 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 NIPSNAP3BQ9BS92 247 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 METTL7AQ9H8H3 244 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 VPS37BQ9H9H4 285 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 ETNK2Q9NVF9 386 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 PRODH2Q9UF12 536 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 PIGLQ9Y2B2 252 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 MEMO1Q9Y316 297 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 MOB4Q9Y3A3 225 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 TIMM10BQ9Y5J6 103 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 USP16Q9Y5T5 823 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 NSD2O96028 1365 aa3.97□□□□□ -1.77
SCFD1-209ENST00000553280 CTAGE15A4D2H0 777 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF840PA6NDX5 716 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 FAM47DPA6NHR8 397 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 OR52A4PA6NMU1 304 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 PP2D1A8MPX8 630 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 E9PAM4 449 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 FOXE1O00358 373 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-209ENST00000553280 TIMM8AO60220 97 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-209ENST00000553280 GALR3O60755 368 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-209ENST00000553280 UGT2B17O75795 530 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 VENTXO95231 258 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 GJB5O95377 273 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 SLC2A10O95528 541 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 CD55P08174 381 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 ALOX5P09917 674 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 SLC2A3P11169 496 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 LAMP1P11279 417 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 TOP1P11387 765 aaKnown RBP3.96□□□□□ -1.78
SCFD1-209ENST00000553280 NCK1P16333 377 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 ELK3P41970 407 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 TDO2P48775 406 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 EFNB2P52799 333 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 HMGCS2P54868 508 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 CDH4P55283 916 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 CCNA1P78396 465 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 MS4A2Q01362 244 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 BST1Q10588 318 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 SLC25A52Q3SY17 297 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 PAQR6Q6TCH4 344 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF600Q6ZNG1 722 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 CTAGE6Q86UF2 777 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 UBE2J2Q8N2K1 259 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 FGFRL1Q8N441 504 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 AKR7LQ8NHP1 331 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 ZBED6CLQ96FA7 236 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-209ENST00000553280 PPP1R16AQ96I34 528 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF599Q96NL3 588 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 PLIN2Q99541 437 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 RBM4BQ9BQ04 359 aaKnown RBP3.96□□□□□ -1.78
SCFD1-209ENST00000553280 SPATA16Q9BXB7 569 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 PNO1Q9NRX1 252 aaKnown RBP3.96□□□□□ -1.78
SCFD1-209ENST00000553280 ARMCX1Q9P291 453 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 ONECUT1Q9UBC0 465 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 SLC2A6Q9UGQ3 507 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 AK6Q9Y3D8 172 aaKnown RBP3.96□□□□□ -1.78
SCFD1-209ENST00000553280 STYXL1Q9Y6J8 313 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 FER1L5A0AVI2 2057 aa3.96□□□□□ -1.78
SCFD1-209ENST00000553280 RPAP1Q9BWH6 1393 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-209ENST00000553280 A0A0J9YWU9 116 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 CCT8L1PA6NM43 557 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF716A6NP11 495 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 E9PLD3 99 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 SGK1O00141 431 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 SAP18O00422 153 aaKnown RBP3.95□□□□□ -1.78
SCFD1-209ENST00000553280 SH3BGRLO75368 114 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 KBTBD11O94819 623 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 TSPAN12O95859 305 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 PGK1P00558 417 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 IGHV3-13P01766 116 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 PIGRP01833 764 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 IGHG4P01861 327 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 HOXD4P09016 255 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF735P0CB33 412 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 LIM2P55344 173 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 SEC61GP60059 68 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 ERVPABLB-1P60509 514 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 OC90Q02509 493 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-209ENST00000553280 SLC10A1Q14973 349 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 PDZK1Q5T2W1 519 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 VITQ6UXI7 678 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF497Q6ZNH5 498 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 GPRIN3Q6ZVF9 776 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 TPRA1Q86W33 373 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 HIPK1Q86Z02 1210 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 ZNF440Q8IYI8 595 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 NECAB1Q8N987 351 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 MFSD9Q8NBP5 474 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 OR51G2Q8NGK0 314 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 ARNTL2Q8WYA1 636 aa3.95□□□□□ -1.78
SCFD1-209ENST00000553280 EFHD2Q96C19 240 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-209ENST00000553280 CNOT6LQ96LI5 555 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms