RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 GCNT6Q5T4J0 391 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 P4HA3Q7Z4N8 544 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 HMGN2P46Q86SG4 172 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 GRAMD2AQ8IUY3 354 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 WDR60Q8WVS4 1066 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 PMM1Q92871 262 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 NSRP1Q9H0G5 558 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 QRSL1Q9H0R6 528 aaKnown RBP16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 MTHFD2LQ9H903 347 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 CHST11Q9NPF2 352 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 SLC52A3Q9NQ40 469 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 SLC25A37Q9NYZ2 338 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 VAPAQ9P0L0 249 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 SLAMF8Q9P0V8 285 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 GPC6Q9Y625 555 aaPredicted RBP16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 MAST4O15021 2626 aa16.69■□□□□ 0.26
PRPF40B-216ENST00000552301 A0A0G2JNJ9 132 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 DBIP07108 87 aaKnown RBP16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 IL7RP16871 459 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 HOXB9P17482 250 aaPredicted RBP16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 PGCP20142 388 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 TIMP3P35625 211 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 ADH7P40394 386 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 KCNJ10P78508 379 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 SKP2Q13309 424 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 NFYCQ13952 458 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 TMEM44Q2T9K0 475 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 CMIPQ8IY22 773 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 SLC38A5Q8WUX1 472 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 ARSGQ96EG1 525 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 TMEM19Q96HH6 336 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 TM9SF2Q99805 663 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 RUBCNLQ9H714 662 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 KCNJ16Q9NPI9 418 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 Q9UFV3 132 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 CAPN7Q9Y6W3 813 aa16.68■□□□□ 0.26
PRPF40B-216ENST00000552301 MBD3L4A6NDZ8 208 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 MBD3L3A6NE82 208 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 AGAP5A6NIR3 686 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 MBD3L5A6NJ08 208 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 DVL2O14641 736 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 LINGO3P0C6S8 592 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 CD1EP15812 388 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 ELK4P28324 431 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 QPRTQ15274 297 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 SGCBQ16585 318 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 MMEL1Q495T6 779 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 AP1ARQ63HQ0 302 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 SEM1Q6ZVN7 128 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 MSRB3Q8IXL7 192 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 DPP10Q8N608 796 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 TNIP2Q8NFZ5 429 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 LILRB4Q8NHJ6 448 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 MBD3L2Q8NHZ7 208 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 FBXO27Q8NI29 283 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 GPR119Q8TDV5 335 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 C10orf82Q8WW14 230 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 TMEM234Q8WY98 164 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 ZG16BQ96DA0 208 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 MRGPRX4Q96LA9 322 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 TREX2Q9BQ50 279 aaPredicted RBP16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 THUMPD3Q9BV44 507 aaKnown RBP16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 FAM107BQ9H098 131 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 TMEM185BQ9H7F4 350 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 A4GALTQ9NPC4 353 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 SAR1AQ9NR31 198 aa16.67■□□□□ 0.26
PRPF40B-216ENST00000552301 TRBV5-3A0A0A0MS03 114 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 KDM4EB2RXH2 506 aaPredicted RBP16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 EIF1AYO14602 144 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 TFPTP0C1Z6 253 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 BMP2P12643 396 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 UQCRBP14927 111 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 COL8A1P27658 744 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 ADH6P28332 368 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 PGM1P36871 562 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 SLC6A8P48029 635 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 CLDN20P56880 219 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 RAC1P63000 192 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 KLF10Q13118 480 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 LARS2Q15031 903 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 CDSNQ15517 529 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 SLC25A35Q3KQZ1 300 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 LIN52Q52LA3 116 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 RPS26P11Q5JNZ5 115 aaPredicted RBP16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 PDSS1Q5T2R2 415 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 HIST2H2BCQ6DN03 193 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 PPP4R4Q6NUP7 873 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 FAM71CQ8NEG0 241 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 OR52P1PQ8NH57 321 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 ZNF563Q8TA94 476 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 BBS10Q8TAM1 723 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 ST8SIA1Q92185 356 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 WNT2BQ93097 391 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 ZFP3Q96NJ6 502 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 KLHDC3Q9BQ90 382 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 PINK1Q9BXM7 581 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 EXOSC3Q9NQT5 275 aaKnown RBP16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 CLCF1Q9UBD9 225 aa16.66■□□□□ 0.26
PRPF40B-216ENST00000552301 HEATR5AQ86XA9 2040 aa16.65■□□□□ 0.26
PRPF40B-216ENST00000552301 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms