RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 ACVR2AP27037 513 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 EIF1P41567 113 aaKnown RBP15.22■□□□□ 0.03
CCDC38-203ENST00000546803 RNF144AP50876 292 aaPredicted RBP15.22■□□□□ 0.03
CCDC38-203ENST00000546803 SRSF1Q07955 248 aaKnown RBP eCLIP15.22■□□□□ 0.03
CCDC38-203ENST00000546803 SCARB2Q14108 478 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 SELPLGQ14242 412 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 PLPPR5Q32ZL2 321 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 NDUFAF6Q330K2 333 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 RPS26P11Q5JNZ5 115 aaPredicted RBP15.22■□□□□ 0.03
CCDC38-203ENST00000546803 TMEM211Q6ICI0 200 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 ZNF585AQ6P3V2 769 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 HACD2Q6Y1H2 254 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 ARPINQ7Z6K5 226 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 KRT73Q86Y46 540 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 SLC30A8Q8IWU4 369 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 GTPBP8Q8N3Z3 284 aaPredicted RBP15.22■□□□□ 0.03
CCDC38-203ENST00000546803 HIPK4Q8NE63 616 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 NFKBIDQ8NI38 313 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 GPR119Q8TDV5 335 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 PHF10Q8WUB8 498 aaKnown RBP15.22■□□□□ 0.03
CCDC38-203ENST00000546803 WDYHV1Q96HA8 205 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 ECSITQ9BQ95 431 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 TRIM8Q9BZR9 551 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 ARMC7Q9H6L4 198 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 STOML1Q9UBI4 398 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 PRDM4Q9UKN5 801 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 ANGPT4Q9Y264 503 aa15.22■□□□□ 0.03
CCDC38-203ENST00000546803 CYP7B1O75881 506 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 PEPDP12955 493 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 PGCP20142 388 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 TCEA1P23193 301 aaKnown RBP15.21■□□□□ 0.03
CCDC38-203ENST00000546803 ADH6P28332 368 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 SLC6A8P48029 635 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 LHX2P50458 406 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 CCR4P51679 360 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 ART3Q13508 389 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 RABL3Q5HYI8 236 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 RNF220Q5VTB9 566 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 FAM91A1Q658Y4 838 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 HMGN2P46Q86SG4 172 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 PTOV1Q86YD1 416 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 ZNF440Q8IYI8 595 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 CCDC197Q8NCU1 140 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 OR10A6Q8NH74 314 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 HOPXQ9BPY8 73 aaPredicted RBP15.21■□□□□ 0.03
CCDC38-203ENST00000546803 SPATA5L1Q9BVQ7 753 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 ALKBH4Q9NXW9 302 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 CAMK2AQ9UQM7 478 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 ZNF443Q9Y2A4 671 aaPredicted RBP15.21■□□□□ 0.03
CCDC38-203ENST00000546803 GPC6Q9Y625 555 aaPredicted RBP15.21■□□□□ 0.03
CCDC38-203ENST00000546803 AP4B1Q9Y6B7 739 aa15.21■□□□□ 0.03
CCDC38-203ENST00000546803 POLEQ07864 2286 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 NBASA2RRP1 2371 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 WIPF3A6NGB9 483 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 CLDN24A6NM45 220 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 ZNF708P17019 499 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 POU3F2P20265 443 aaPredicted RBP15.2■□□□□ 0.02
CCDC38-203ENST00000546803 SLC25A53Q5H9E4 307 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 ZNF311Q5JNZ3 666 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 DCST1Q5T197 706 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 MRPL2Q5T653 305 aaKnown RBP15.2■□□□□ 0.02
CCDC38-203ENST00000546803 C1orf185Q5T7R7 199 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 CALHM3Q86XJ0 350 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 VRK2Q86Y07 508 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 GRAMD2AQ8IUY3 354 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 ULK2Q8IYT8 1036 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 ZPLD1Q8TCW7 415 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 SSC4DQ8WTU2 575 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 TMEM234Q8WY98 164 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 ST8SIA1Q92185 356 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 CNOT9Q92600 299 aaKnown RBP15.2■□□□□ 0.02
CCDC38-203ENST00000546803 MRGPRX4Q96LA9 322 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 DMRTA2Q96SC8 542 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 ZNF607Q96SK3 696 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 KLHDC3Q9BQ90 382 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 GPATCH1Q9BRR8 931 aaKnown RBP15.2■□□□□ 0.02
CCDC38-203ENST00000546803 ZNF337Q9Y3M9 751 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 NINQ8N4C6 2090 aa15.2■□□□□ 0.02
CCDC38-203ENST00000546803 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 CDHR4A6H8M9 788 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 PRORSD1PA6NEY8 169 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 ETV2O00321 342 aaPredicted RBP15.19■□□□□ 0.02
CCDC38-203ENST00000546803 BCAS1O75363 584 aaPredicted RBP15.19■□□□□ 0.02
CCDC38-203ENST00000546803 SERPINB7O75635 380 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 LDLRP01130 860 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 PABPC4LP0CB38 370 aaKnown RBP15.19■□□□□ 0.02
CCDC38-203ENST00000546803 PRKCAP17252 672 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 PSMA4P25789 261 aaKnown RBP15.19■□□□□ 0.02
CCDC38-203ENST00000546803 ELK4P28324 431 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 PCGF2P35227 344 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 STARP49675 285 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 NUDT2P50583 147 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 GZMMP51124 257 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 CLDN18P56856 261 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 EEFSECP57772 596 aaKnown RBP15.19■□□□□ 0.02
CCDC38-203ENST00000546803 EEF1A1P68104 462 aaKnown RBP15.19■□□□□ 0.02
CCDC38-203ENST00000546803 QPRTQ15274 297 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 VMACQ2NL98 169 aa15.19■□□□□ 0.02
CCDC38-203ENST00000546803 INTS11Q5TA45 600 aaKnown RBP15.19■□□□□ 0.02
CCDC38-203ENST00000546803 ERICH5Q6P6B1 374 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms