RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 CENPVL1A0A0U1RR11 272 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 TCRBV16S1A1N1A0A5B0 115 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CLDN24A6NM45 220 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SNTNA6NMZ2 147 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CLCA1A8K7I4 914 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ZNF99A8MXY4 864 aaPredicted RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 NPIPA7E9PJI5 369 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 HRKO00198 91 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 AHCYL1O43865 530 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 TRMUO75648 421 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 FADS2O95864 444 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 MT-ND2P03891 347 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 F13BP05160 661 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 HTR1AP08908 422 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 HBQ1P09105 142 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 NPIPA8P0DM63 369 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CKMT1AP12532 417 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 HPGDP15428 266 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 GABRB1P18505 474 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 FUT4P22083 530 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 FPR3P25089 353 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 LCN1P31025 176 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 PEX19P40855 299 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 PPICP45877 212 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ST13P50502 369 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ZNF136P52737 540 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ATP12AP54707 1039 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 TMBIM6P55061 237 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 DCAF7P61962 342 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 PSPHP78330 225 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 HOXC5Q00444 222 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 RHAGQ02094 409 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 OCA2Q04671 838 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 GINS1Q14691 196 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 OR1Q1Q15612 314 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 NSDHLQ15738 373 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ZNF141Q15928 474 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 MAPK14Q16539 360 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SMN1Q16637 294 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 TRIM61Q5EBN2 209 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 PDZK1Q5T2W1 519 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 C1orf189Q5VU69 101 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 TMEM236Q5W0B7 351 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 HLA-DQA1Q5Y7H0 255 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 C12orf73Q69YU5 71 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 XAF1Q6GPH4 301 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 RHBDD2Q6NTF9 364 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SLC27A4Q6P1M0 643 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ZNF613Q6PF04 617 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SLC23A3Q6PIS1 610 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ZC3H14Q6PJT7 736 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 NPSR1Q6W5P4 371 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CCDC81Q6ZN84 652 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 RASSF6Q6ZTQ3 369 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ARHGAP22Q7Z5H3 698 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 GRAMD2AQ8IUY3 354 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ERI1Q8IV48 349 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SLITRK4Q8IW52 837 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CDK20Q8IZL9 346 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 RNF113BQ8IZP6 322 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SHISA5Q8N114 240 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CYP4Z2PQ8N1L4 340 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 STX19Q8N4C7 294 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ZNF615Q8N8J6 731 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 RCBTB1Q8NDN9 531 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 C9orf43Q8TAL5 461 aaPredicted RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 IFI44Q8TCB0 444 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 RAB2BQ8WUD1 216 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SGCDQ92629 289 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 TSLPQ969D9 159 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 UBE2FQ969M7 185 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CCDC74BQ96LY2 380 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 HS6ST2Q96MM7 605 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 FANCD2OSQ96PS1 177 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 GFM1Q96RP9 751 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 GTPBP2Q9BX10 602 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ITPAQ9BY32 194 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 OR8D2Q9GZM6 311 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 LHPPQ9H008 270 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SLC25A19Q9HC21 320 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 FSCN3Q9NQT6 498 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 FBXO34Q9NWN3 711 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 PAK1IP1Q9NWT1 392 aaPredicted RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 ZNF226Q9NYT6 803 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CNOT2Q9NZN8 540 aaKnown RBP6.49□□□□□ -1.37
SPPL3-209ENST00000545209 RPS6KB2Q9UBS0 482 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 PSORS1C1Q9UIG5 152 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SLC7A7Q9UM01 511 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SLC35A3Q9Y2D2 325 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 CHST2Q9Y4C5 530 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 U3KQA8 63 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 NCOR1O75376 2440 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 SCN2AQ99250 2005 aa6.49□□□□□ -1.37
SPPL3-209ENST00000545209 TECTAO75443 2155 aa6.48□□□□□ -1.37
SPPL3-209ENST00000545209 TNRC6BQ9UPQ9 1833 aaKnown RBP6.48□□□□□ -1.37
SPPL3-209ENST00000545209 IGHV5-10-1A0A0J9YXX1 117 aa6.48□□□□□ -1.37
SPPL3-209ENST00000545209 IRGMA1A4Y4 181 aa6.48□□□□□ -1.37
SPPL3-209ENST00000545209 OR2W5A6NFC9 320 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms