RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 SEMA4FO95754 770 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PAHP00439 452 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 RPL35P42766 123 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 SOX9P48436 509 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GIPRP48546 466 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 CTBSQ01459 385 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GALEQ14376 348 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SEC23BQ15437 767 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GPR19Q15760 415 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 FXNQ16595 210 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TMEM215Q68D42 235 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ANKRD54Q6NXT1 300 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 LILRA6Q6PI73 481 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TMEM64Q6YI46 380 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ARMC10Q8N2F6 343 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 CLDN22Q8N7P3 220 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TRMT10AQ8TBZ6 339 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 MS4A6EQ96DS6 147 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ASB16Q96NS5 453 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 RHNO1Q9BSD3 238 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SEMA4GQ9NTN9 838 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 NDUFB11Q9NX14 153 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 CLEC2DQ9UHP7 191 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 CORINQ9Y5Q5 1042 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TRAV6A0A075B6T7 132 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 A0A1W2PRQ8 180 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 CTDSP2O14595 271 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 LGI1O95970 557 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PLATP00750 562 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 IFNA21P01568 189 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 F3P13726 295 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ZNF823P16415 610 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 RAB3BP20337 219 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 CBLP22681 906 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 FPR3P25089 353 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 UQCRC1P31930 480 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 MASP1P48740 699 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 HHEXQ03014 270 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PUM1Q14671 1186 aaKnown RBP eCLIP5.41□□□□□ -1.54
VPS50-220ENST00000544910 MLC1Q15049 377 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SF3A2Q15428 464 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 NUP54Q7Z3B4 507 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GDF7Q7Z4P5 450 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ATCAYQ86WG3 371 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 RNF113BQ8IZP6 322 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 OR4F15Q8NGB8 312 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 APH1BQ8WW43 257 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 FCAMRQ8WWV6 532 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ZNF471Q9BX82 626 aaPredicted RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 ABCG4Q9H172 646 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 RNF167Q9H6Y7 350 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SLC2A4RGQ9NR83 387 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TAS2R10Q9NYW0 307 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ICKQ9UPZ9 632 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PLEKHM1Q9Y4G2 1056 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 A0A0A6YYD5 115 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 KHNYNO15037 678 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 NCR1O76036 304 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 CISD3P0C7P0 127 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 GP1BBP13224 206 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 DRD1P21728 446 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 MMP11P24347 488 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 RBMS1P29558 406 aaKnown RBP5.41□□□□□ -1.54
VPS50-220ENST00000544910 MAP3K8P41279 467 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PITPNBP48739 271 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 KIAA1024LP59773 190 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 HYAL2Q12891 473 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SNTA1Q13424 505 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 FGL2Q14314 439 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ATAD3CQ5T2N8 411 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 OR2G6Q5TZ20 316 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 Q6ZSR6 202 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 OR4C15Q8NGM1 316 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 OR6T1Q8NGN1 323 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 THEM6Q8WUY1 208 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PEX11GQ96HA9 241 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SNX18Q96RF0 628 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 EXO5Q9H790 373 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 SCP2D1Q9UJQ7 156 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 TMPRSS11EQ9UL52 423 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 ATG4BQ9Y4P1 393 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 PIAS3Q9Y6X2 628 aa5.41□□□□□ -1.54
VPS50-220ENST00000544910 C2orf92A0A1B0GVN3 265 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 TMPRSS11DO60235 418 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 CPEP16870 476 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 EPHA2P29317 976 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 SSTR4P31391 388 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 NR4A2P43354 598 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 RPS5P46782 204 aaKnown RBP5.4□□□□□ -1.54
VPS50-220ENST00000544910 LIM2P55344 173 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 AIMP2Q13155 320 aaKnown RBP5.4□□□□□ -1.54
VPS50-220ENST00000544910 EXOSC7Q15024 291 aaKnown RBP5.4□□□□□ -1.54
VPS50-220ENST00000544910 NKAPLQ5M9Q1 402 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 CCNJQ5T5M9 372 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 NXNL2Q5VZ03 156 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 MS4A15Q8N5U1 240 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 GATSQ8NAP1 163 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 CHST4Q8NCG5 386 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 OR4K13Q8NH42 304 aa5.4□□□□□ -1.54
VPS50-220ENST00000544910 TMEM255BQ8WV15 326 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms