RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ACY1Q03154 408 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF33BQ06732 778 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CHI3L2Q15782 390 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 TMEM44Q2T9K0 475 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 DCAF4L1Q3SXM0 396 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 LEG1Q6P5S2 330 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 RFWD3Q6PCD5 774 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF497Q6ZNH5 498 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 VPS36Q86VN1 386 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CATSPER3Q86XQ3 398 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 FRAT1Q92837 279 aaPredicted RBP3□□□□□ -1.93
SCFD1-207ENST00000544052 ELMO2Q96JJ3 720 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 LINC00479Q96M42 142 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 AGAP3Q96P47 875 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CASD1Q96PB1 797 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 TXN2Q99757 166 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 FAM173AQ9BQD7 235 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CHCHD5Q9BSY4 110 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 MEAF6Q9HAF1 191 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 CTSZQ9UBR2 303 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 PTPRSQ13332 1948 aa3□□□□□ -1.93
SCFD1-207ENST00000544052 UNC80Q8N2C7 3258 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 NPIPA5A0A0B4J1W7 369 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 MFSD2BA6NFX1 497 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 NPIPA5E9PKD4 350 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 H7C423 109 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 GMFGO60234 142 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 IDH1O75874 414 aaKnown RBP2.99□□□□□ -1.93
SCFD1-207ENST00000544052 NEBLO76041 1014 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 KRT8P05787 483 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 UQCRBP14927 111 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 LMO2P25791 158 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 METAP1P53582 386 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 KRTAP10-6P60371 365 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-207ENST00000544052 RAB35Q15286 201 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 UBE2V2Q15819 145 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 MAPK6Q16659 721 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 PCK2Q16822 640 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 C9orf66Q5T8R8 295 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 ADAM5Q6NVV9 412 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 DOK6Q6PKX4 331 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 RGS9BPQ6ZS82 235 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 Q6ZTC4 211 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 CENPUQ71F23 418 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 ZNF671Q8TAW3 534 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 NPRL2Q8WTW4 380 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 N4BP2L2Q92802 583 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-207ENST00000544052 C18orf25Q96B23 403 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-207ENST00000544052 RIOK1Q9BRS2 568 aaKnown RBP2.99□□□□□ -1.93
SCFD1-207ENST00000544052 LRRC61Q9BV99 259 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 PORCNQ9H237 461 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 TUBB1Q9H4B7 451 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 DHX33Q9H6R0 707 aaKnown RBP2.99□□□□□ -1.93
SCFD1-207ENST00000544052 COG4Q9H9E3 785 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 LPAR2Q9HBW0 351 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 MLXQ9UH92 298 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 SPATA2Q9UM82 520 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 DHRS7Q9Y394 339 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 SPTBN5Q9NRC6 3674 aaKnown RBP2.99□□□□□ -1.93
SCFD1-207ENST00000544052 LAMA4Q16363 1823 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 NPIPA2E9PIF3 369 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 MCF2LO15068 1137 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 JAK2O60674 1132 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 IGHV3-9P01782 118 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 RPA2P15927 270 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 HTR2AP28223 471 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 MAGEA5P43359 124 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 MFAP2P55001 183 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 PRMT2P55345 433 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 EIF2B1Q14232 305 aaKnown RBP2.99□□□□□ -1.93
SCFD1-207ENST00000544052 PDK4Q16654 411 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 EMBQ6PCB8 327 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 BTNL3Q6UXE8 466 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 CYS1Q717R9 158 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 DPY19L4Q7Z388 723 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 WDSUB1Q8N9V3 476 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 ACER1Q8TDN7 264 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 UPRTQ96BW1 309 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 ATF6BQ99941 703 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 C19orf43Q9BQ61 176 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 TTYH2Q9BSA4 534 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 TMEM121Q9BTD3 319 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 ZSCAN5AQ9BUG6 496 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 SLC25A51Q9H1U9 297 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 DCAF16Q9NXF7 216 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 RAI14Q9P0K7 980 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 AP4B1Q9Y6B7 739 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 VCANP13611 3396 aa2.99□□□□□ -1.93
SCFD1-207ENST00000544052 MYH6P13533 1939 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 IGHV3-16A0A0C4DH30 117 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 SURF6O75683 361 aaKnown RBP2.98□□□□□ -1.93
SCFD1-207ENST00000544052 CSF2P04141 144 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 IQCF3P0C7M6 154 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 TRIM49P0CI25 452 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 TRIM49CP0CI26 452 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 ANXA3P12429 323 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 XRCC1P18887 633 aaPredicted RBP2.98□□□□□ -1.93
SCFD1-207ENST00000544052 PPP2R1BP30154 601 aa2.98□□□□□ -1.93
SCFD1-207ENST00000544052 HMGCLP35914 325 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms