RNA–Protein interactions for RNA: ENST00000543393.5

RAP1B-229, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAP1B, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-229ENST00000543393 ZNF433Q8N7K0 673 aaPredicted RBP16.09■□□□□ 0.17
RAP1B-229ENST00000543393 ATP6V1C2Q8NEY4 427 aa16.09■□□□□ 0.17
RAP1B-229ENST00000543393 OR52N5Q8NH56 324 aa16.09■□□□□ 0.17
RAP1B-229ENST00000543393 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.09■□□□□ 0.17
RAP1B-229ENST00000543393 ZFP90Q8TF47 636 aa16.09■□□□□ 0.17
RAP1B-229ENST00000543393 C3orf49Q96BT1 292 aa16.09■□□□□ 0.17
RAP1B-229ENST00000543393 ZNF775Q96BV0 537 aaPredicted RBP16.09■□□□□ 0.17
RAP1B-229ENST00000543393 ZNF300Q96RE9 604 aaPredicted RBP16.09■□□□□ 0.17
RAP1B-229ENST00000543393 MRPL57Q9BQC6 102 aaKnown RBP16.09■□□□□ 0.17
RAP1B-229ENST00000543393 MRPL46Q9H2W6 279 aaKnown RBP16.09■□□□□ 0.17
RAP1B-229ENST00000543393 UBQLN4Q9NRR5 601 aa16.09■□□□□ 0.17
RAP1B-229ENST00000543393 SIRT5Q9NXA8 310 aa16.09■□□□□ 0.17
RAP1B-229ENST00000543393 RAD51DO75771 328 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 SUPT7LO94864 414 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 KCNK2O95069 426 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 BMP4P12644 408 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 APEHP13798 732 aaKnown RBP16.08■□□□□ 0.16
RAP1B-229ENST00000543393 CAV1Q03135 178 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 RASGEF1BQ0VAM2 473 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 ARL13AQ5H913 290 aaPredicted RBP16.08■□□□□ 0.16
RAP1B-229ENST00000543393 ZNF544Q6NX49 715 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 KLHL17Q6TDP4 642 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 GPRIN3Q6ZVF9 776 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 ZNF551Q7Z340 670 aaPredicted RBP16.08■□□□□ 0.16
RAP1B-229ENST00000543393 DEPDC4Q8N2C3 294 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 TMEM151AQ8N4L1 468 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 FBXO27Q8NI29 283 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 FBXO30Q8TB52 745 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 ZNF382Q96SR6 550 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 INPP5KQ9BT40 448 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 C12orf65Q9H3J6 166 aaKnown RBP16.08■□□□□ 0.16
RAP1B-229ENST00000543393 ARFGEF3Q5TH69 2177 aa16.08■□□□□ 0.16
RAP1B-229ENST00000543393 A0A1W2PQD3 144 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 ESYT3A0FGR9 886 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 SCDO00767 359 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 NUDT14O95848 222 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 TGFAP01135 160 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 IFI6P09912 130 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 ITGA2P17301 1181 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 NR4A2P43354 598 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 PDLIM4P50479 330 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 PRKAG1P54619 331 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 RAC3P60763 192 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 ZNF117Q03924 483 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 CHRNEQ04844 493 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 HSPB3Q12988 150 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 CR1LQ2VPA4 569 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 UNC50Q53HI1 259 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 SPDYAQ5MJ70 313 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 ZDHHC24Q6UX98 284 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 CDRT4Q8N9R6 151 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 SLC16A11Q8NCK7 471 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 OR6Y1Q8NGX8 325 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 PIMREGQ9BSJ6 248 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 ADAM19Q9H013 955 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 MYNNQ9NPC7 610 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 TIMM22Q9Y584 194 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 SLC25A15Q9Y619 301 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 PMF1-BGLAPU3KQ54 211 aa16.07■□□□□ 0.16
RAP1B-229ENST00000543393 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 IGHV4-61A0A0C4DH41 118 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 A0A1W2PNR3 127 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 A0A1W2PR80 420 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 M0R1B8 84 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 KIF2AO00139 706 aaPredicted RBP16.06■□□□□ 0.16
RAP1B-229ENST00000543393 NDUFS8O00217 210 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 KCNAB3O43448 404 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 ACP2P11117 423 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 GPC1P35052 558 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 CHRNB3Q05901 458 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 ZNF678Q5SXM1 525 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 CBLN3Q6UW01 205 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 ZNF100Q8IYN0 542 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.06■□□□□ 0.16
RAP1B-229ENST00000543393 ZNF75CPQ92670 426 aaPredicted RBP16.06■□□□□ 0.16
RAP1B-229ENST00000543393 GIMAP5Q96F15 307 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 UTP11Q9Y3A2 253 aaKnown RBP16.06■□□□□ 0.16
RAP1B-229ENST00000543393 GPC6Q9Y625 555 aaPredicted RBP16.06■□□□□ 0.16
RAP1B-229ENST00000543393 TENM1Q9UKZ4 2725 aa16.06■□□□□ 0.16
RAP1B-229ENST00000543393 ZNF724A8MTY0 619 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 SMAD9O15198 467 aaKnown RBP16.05■□□□□ 0.16
RAP1B-229ENST00000543393 OIP5O43482 229 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 CYTIPO60759 359 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 SLC7A1P30825 629 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 LCN1P31025 176 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 TOMM34Q15785 309 aaPredicted RBP16.05■□□□□ 0.16
RAP1B-229ENST00000543393 DUSP5Q16690 384 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 TEX35Q5T0J7 233 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 CCNJQ5T5M9 372 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 SZRD1Q7Z422 152 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 GALNT5Q7Z7M9 940 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 CEP70Q8NHQ1 597 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 PHOSPHO1Q8TCT1 267 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 FOXN4Q96NZ1 517 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 TMEM237Q96Q45 408 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 KCNA7Q96RP8 456 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 NAPGQ99747 312 aaPredicted RBP16.05■□□□□ 0.16
RAP1B-229ENST00000543393 NTMQ9P121 344 aa16.05■□□□□ 0.16
RAP1B-229ENST00000543393 POLR3HQ9Y535 204 aaPredicted RBP16.05■□□□□ 0.16
RAP1B-229ENST00000543393 ATP23Q9Y6H3 246 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms