RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 NANOGNBQ7Z5D8 188 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 GOLGA7Q7Z5G4 137 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 PARGQ86W56 976 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 SPC24Q8NBT2 197 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 LEMD2Q8NC56 503 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 OR52K1Q8NGK4 314 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 ELSPBP1Q96BH3 223 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 TCEANC2Q96MN5 208 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 SPATA13Q96N96 652 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 SDHCQ99643 169 aaPredicted RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 CARD6Q9BX69 1037 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 ABCG8Q9H221 673 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 MTRF1LQ9UGC7 380 aaKnown RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 ATPIF1Q9UII2 106 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 HOOK1Q9UJC3 728 aaKnown RBP3.96□□□□□ -1.78
YBX3-210ENST00000540975 NSD2O96028 1365 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 GRIN2BQ13224 1484 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 PLXNC1O60486 1568 aa3.96□□□□□ -1.78
YBX3-210ENST00000540975 TOPBP1Q92547 1522 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 SUPT6HQ7KZ85 1726 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 SAMD9Q5K651 1589 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 LAMC3Q9Y6N6 1575 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 SCAF11Q99590 1463 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 MBD5Q9P267 1494 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 ZW10O43264 779 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 TRIM16O95361 564 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 PGK1P00558 417 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 IGFBP1P08833 259 aaPredicted RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 ABHD2P08910 425 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 PDHBP11177 359 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 HPGDP15428 266 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 GAP43P17677 238 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 ANXA13P27216 316 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 RANBP1P43487 201 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 SLC26A2P50443 739 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 AP3M2P53677 418 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 HADHBP55084 474 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 DSTNP60981 165 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 RPL32P62910 135 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 MRPS15P82914 257 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 CUL2Q13617 745 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 MXD4Q14582 209 aaPredicted RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 LASP1Q14847 261 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 CYP51A1Q16850 503 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 LRIT3Q3SXY7 679 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 CFAP221Q4G0U5 840 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 WSCD1Q658N2 575 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 PNCKQ6P2M8 343 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 LEG1Q6P5S2 330 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 SYT10Q6XYQ8 523 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 HACD2Q6Y1H2 254 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 RGS9BPQ6ZS82 235 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 ERI1Q8IV48 349 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 WDR36Q8NI36 951 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 AGR3Q8TD06 166 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 ARL5BQ96KC2 179 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 TMEM237Q96Q45 408 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 GAL3ST1Q99999 423 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 NT5C3AQ9H0P0 336 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 DDX47Q9H0S4 455 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 PSTPIP2Q9H939 334 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 GLRX2Q9NS18 164 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 EXTL2Q9UBQ6 330 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 CLEC4AQ9UMR7 237 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 CHTOPQ9Y3Y2 248 aaKnown RBP3.95□□□□□ -1.78
YBX3-210ENST00000540975 UGGT2Q9NYU1 1516 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 FHOD3Q2V2M9 1422 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 MROH5Q6ZUA9 1318 aa3.95□□□□□ -1.78
YBX3-210ENST00000540975 GCC2Q8IWJ2 1684 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 RPRD2Q5VT52 1461 aaKnown RBP3.94□□□□□ -1.78
YBX3-210ENST00000540975 NOTCH2Q04721 2471 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 ANKRD30BQ9BXX2 1392 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 TRBV2A0A0J9YWF9 115 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 OR6C65A6NJZ3 312 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 LSM1O15116 133 aaKnown RBP3.94□□□□□ -1.78
YBX3-210ENST00000540975 NVLO15381 856 aaKnown RBP3.94□□□□□ -1.78
YBX3-210ENST00000540975 POLR2DO15514 142 aaKnown RBP3.94□□□□□ -1.78
YBX3-210ENST00000540975 ZNF861PO60384 105 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 RAMP1O60894 148 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 SMPD2O60906 423 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 PNPP00491 289 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 ASGR1P07306 291 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 GCFC2P16383 781 aaKnown RBP3.94□□□□□ -1.78
YBX3-210ENST00000540975 MDKP21741 143 aaPredicted RBP3.94□□□□□ -1.78
YBX3-210ENST00000540975 HERVK_113P63132 956 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 ERVK-8P63133 956 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 PSG7Q13046 419 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 IL17AQ16552 155 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 CCDC57Q2TAC2 916 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 C2orf76Q3KRA6 126 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 C8orf74Q6P047 294 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 ADAMTSL2Q86TH1 951 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 NKAIN4Q8IVV8 208 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 RNF10Q8N5U6 811 aaKnown RBP3.94□□□□□ -1.78
YBX3-210ENST00000540975 RAPGEF5Q92565 580 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 CABS1Q96KC9 395 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 ATP6V1G3Q96LB4 118 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 ERVK-6Q9BXR3 956 aa3.94□□□□□ -1.78
YBX3-210ENST00000540975 FTHL17Q9BXU8 183 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms