RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 PANX1Q96RD7 426 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ARHGAP9Q9BRR9 750 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 FUZQ9BT04 418 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 KLF16Q9BXK1 252 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 SMG9Q9H0W8 520 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ATP13A1Q9HD20 1204 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 PPP4R1LQ9P1A2 415 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 NDOR1Q9UHB4 597 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 TMEM129A0AVI4 362 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 GSAPA4D1B5 854 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 URADA6NGE7 173 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ZNF879B4DU55 563 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 DVL2O14641 736 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 LDB2O43679 373 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 PIP5K1CO60331 668 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 SCN2BO60939 215 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 KRT33AO76009 404 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 STC2O76061 302 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 IGHV2-5P01817 119 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 HLA-DPB1P04440 258 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 CKMP06732 381 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 CPN1P15169 458 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 IFNGR1P15260 489 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ACHEP22303 614 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 TACR1P25103 407 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 LIMS1P48059 325 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 POU4F2Q12837 409 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 KLF9Q13886 244 aaPredicted RBP8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 KCNAB1Q14722 419 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 TEAD2Q15562 447 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 OCLNQ16625 522 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 IFI44LQ53G44 452 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 MS4A13Q5J8X5 152 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 C12orf73Q69YU5 71 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 CRTC1Q6UUV9 634 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC29A4Q7RTT9 530 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 SLC30A8Q8IWU4 369 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ARHGAP12Q8IWW6 846 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 CPXM2Q8N436 756 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ZSCAN1Q8NBB4 408 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 OR8J1Q8NGP2 316 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 HUS1BQ8NHY5 278 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 THAP4Q8WY91 577 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 SLAMF9Q96A28 289 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 PNPLA2Q96AD5 504 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ZFP3Q96NJ6 502 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 NANSQ9NR45 359 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 ZSCAN32Q9NX65 697 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 CA14Q9ULX7 337 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 DHRS7Q9Y394 339 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 UNC80Q8N2C7 3258 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 NINQ8N4C6 2090 aa8.84□□□□□ -0.99
CTNNA1-243ENST00000540387 A0A1W2PRB8 838 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 A0A1W2PRQ8 180 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 MAGEB17A8MXT2 336 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 NEDD8-MDP1E9PL57 170 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 ARPC1BO15143 372 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 PPIHO43447 177 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 EIF4E2O60573 245 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 RBBP9O75884 186 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 ZNF35P13682 527 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 EDN3P14138 238 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 NQO2P16083 231 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 ABOP16442 354 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 ANXA7P20073 488 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 STC1P52823 247 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 HBMQ6B0K9 141 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 RPL13AP3Q6NVV1 102 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 MTFR2Q6P444 385 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 NKAPQ8N5F7 415 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 ZNF383Q8NA42 475 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 OR1S2Q8NGQ3 325 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 OR51Q1Q8NH59 317 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 EEF1AKMT1Q8WVE0 214 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 MYEOVQ96EZ4 313 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 MARS2Q96GW9 593 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 HS6ST2Q96MM7 605 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 COPS8Q99627 209 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 ACSS1Q9NUB1 689 aaPredicted RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 C2orf42Q9NWW7 574 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 OPN4Q9UHM6 478 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 PCDHB10Q9UN67 800 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 GFYI3L273 518 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 ULK1O75385 1050 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 UBBP0CG47 229 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 UBCP0CG48 685 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 OSMP13725 252 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 PSMB1P20618 241 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 CORO1AP31146 461 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 THBS2P35442 1172 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 RPS27AP62979 156 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 UBA52P62987 128 aaKnown RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 OC90Q02509 493 aaPredicted RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 PCBP2Q15366 365 aaKnown RBP eCLIP8.83□□□□□ -1
CTNNA1-243ENST00000540387 AFMIDQ63HM1 303 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 CDPF1Q6NVV7 123 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 FBXL22Q6P050 247 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 GLDNQ6ZMI3 551 aaPredicted RBP8.83□□□□□ -1
CTNNA1-243ENST00000540387 TRIM46Q7Z4K8 759 aa8.83□□□□□ -1
CTNNA1-243ENST00000540387 TGIF2LXQ8IUE1 241 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms