RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 PGM3O95394 542 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 ESRRAP11474 423 aaPredicted RBP19.97■□□□□ 0.79
TRIM65-202ENST00000540128 NID1P14543 1247 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 PSMA4P25789 261 aaKnown RBP19.97■□□□□ 0.79
TRIM65-202ENST00000540128 MTPNP58546 118 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 CDK6Q00534 326 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 PLAURQ03405 335 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 CAPRIN1Q14444 709 aaKnown RBP19.97■□□□□ 0.79
TRIM65-202ENST00000540128 NDUFAF6Q330K2 333 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 RTL6Q6ICC9 239 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 ZNF585AQ6P3V2 769 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 NET1Q7Z628 596 aaPredicted RBP19.97■□□□□ 0.79
TRIM65-202ENST00000540128 ULK2Q8IYT8 1036 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 BBS10Q8TAM1 723 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 SSC4DQ8WTU2 575 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 EXOSC3Q9NQT5 275 aaKnown RBP19.97■□□□□ 0.79
TRIM65-202ENST00000540128 GID8Q9NWU2 228 aa19.97■□□□□ 0.79
TRIM65-202ENST00000540128 GMFGO60234 142 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 BCAS1O75363 584 aaPredicted RBP19.96■□□□□ 0.79
TRIM65-202ENST00000540128 FAM107AO95990 144 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 THBS1P07996 1170 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 ETS2P15036 469 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 ZNF708P17019 499 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 EIF1P41567 113 aaKnown RBP19.96■□□□□ 0.79
TRIM65-202ENST00000540128 STARP49675 285 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 GZMMP51124 257 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 ZNF41P51814 821 aaPredicted RBP19.96■□□□□ 0.79
TRIM65-202ENST00000540128 CLDN18P56856 261 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 RBBP4Q09028 425 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 ZSWIM7Q19AV6 140 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 RAET1LQ5VY80 246 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 TMEM211Q6ICI0 200 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 REEP3Q6NUK4 255 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 C3P1Q6ZMU1 363 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 SERPINA11Q86U17 422 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 POU5F2Q8N7G0 328 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 OR52P1PQ8NH57 321 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 CCDC120Q96HB5 630 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 TRIM8Q9BZR9 551 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 PRDM4Q9UKN5 801 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 ZNF337Q9Y3M9 751 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 FAM215AQ9Y5M1 114 aa19.96■□□□□ 0.79
TRIM65-202ENST00000540128 CLDN24A6NM45 220 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 C5orf58C9J3I9 102 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 FAM47E-STBD1D6RA91 191 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 NTN1O95631 604 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 UBTFL6P0CB48 400 aaPredicted RBP19.95■□□□□ 0.78
TRIM65-202ENST00000540128 PEPDP12955 493 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 IL7RP16871 459 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 ADH6P28332 368 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 PRDX6P30041 224 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 DLX5P56178 289 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 SF3B4Q15427 424 aaKnown RBP eCLIP19.95■□□□□ 0.781e-7■■■■■ 29.3
TRIM65-202ENST00000540128 SLC25A53Q5H9E4 307 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 RPS26P11Q5JNZ5 115 aaPredicted RBP19.95■□□□□ 0.78
TRIM65-202ENST00000540128 HMGN2P46Q86SG4 172 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 PTOV1Q86YD1 416 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 MARVELD2Q8N4S9 558 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 NFKBIDQ8NI38 313 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 POC1BQ8TC44 478 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 ZPLD1Q8TCW7 415 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 WDR60Q8WVS4 1066 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 ZNF524Q96C55 264 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 RCN3Q96D15 328 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 CMTM5Q96DZ9 223 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 SLC39A3Q9BRY0 314 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 ZNF232Q9UNY5 417 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 VDAC3Q9Y277 283 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 IFT52Q9Y366 437 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 GPC6Q9Y625 555 aaPredicted RBP19.95■□□□□ 0.78
TRIM65-202ENST00000540128 AP4B1Q9Y6B7 739 aa19.95■□□□□ 0.78
TRIM65-202ENST00000540128 SPTAN1Q13813 2472 aaKnown RBP19.94■□□□□ 0.78
TRIM65-202ENST00000540128 DOPEY2Q9Y3R5 2298 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 RNF224P0DH78 156 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 TCEA1P23193 301 aaKnown RBP19.94■□□□□ 0.78
TRIM65-202ENST00000540128 SLC6A2P23975 617 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 ADORA2A-AS1P86434 159 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 CBFBQ13951 182 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 TOMM34Q15785 309 aaPredicted RBP19.94■□□□□ 0.78
TRIM65-202ENST00000540128 C1orf185Q5T7R7 199 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 RPTNQ6XPR3 784 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 HACD2Q6Y1H2 254 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 CALHM3Q86XJ0 350 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 GRAMD2AQ8IUY3 354 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 C11orf65Q8NCR3 313 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 OR5M1Q8NGP8 315 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 CNOT9Q92600 299 aaKnown RBP19.94■□□□□ 0.78
TRIM65-202ENST00000540128 NPAS1Q99742 590 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 GPATCH1Q9BRR8 931 aaKnown RBP19.94■□□□□ 0.78
TRIM65-202ENST00000540128 TTYH2Q9BSA4 534 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 EFCAB1Q9HAE3 211 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 DNAJB12Q9NXW2 375 aaKnown RBP19.94■□□□□ 0.78
TRIM65-202ENST00000540128 ALKBH4Q9NXW9 302 aa19.94■□□□□ 0.78
TRIM65-202ENST00000540128 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.93■□□□□ 0.78
TRIM65-202ENST00000540128 CDHR4A6H8M9 788 aa19.93■□□□□ 0.78
TRIM65-202ENST00000540128 EPPINO95925 133 aa19.93■□□□□ 0.78
TRIM65-202ENST00000540128 PRKCAP17252 672 aa19.93■□□□□ 0.78
TRIM65-202ENST00000540128 EEF1A1P68104 462 aaKnown RBP19.93■□□□□ 0.78
TRIM65-202ENST00000540128 SCARB2Q14108 478 aa19.93■□□□□ 0.78
TRIM65-202ENST00000540128 LARS2Q15031 903 aaKnown RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms