RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 MKXQ8IYA7 352 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 GCM1Q9NP62 436 aa17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 GOLGA4Q13439 2230 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-203ENST00000535236 IGHG1P01857 330 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 APOC3P02656 99 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF140P52738 457 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 DCAF7P61962 342 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 DCAF12Q5T6F0 453 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 NIPAL3Q6P499 406 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 DCUN1D4Q92564 292 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 MRI1Q9BV20 369 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 EVA1AQ9H8M9 152 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 DNAJC25-GNG10A0A024R161 153 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 FAM155AB1AL88 458 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF780AO75290 641 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 ARSBP15848 533 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 CPOXP36551 454 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 RNF128Q8TEB7 428 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 DCBLD2Q96PD2 775 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 FIZ1Q96SL8 496 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 SLC25A18Q9H1K4 315 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 EBF1Q9UH73 591 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 MON2Q7Z3U7 1717 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 DENRO43583 198 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 SLC16A7O60669 478 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 FOXA1P55317 472 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 MOB3CQ70IA8 216 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 CCDC28AQ8IWP9 274 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 AGBL5Q8NDL9 886 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 IL1F10Q8WWZ1 152 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 UBQLN4Q9NRR5 601 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 DVL2O14641 736 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 MRPL33O75394 65 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 ICAM2P13598 275 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 ACPPP15309 386 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 PSMB10P40306 273 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 ATP1B3P54709 279 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 GRAMD2AQ8IUY3 354 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 DTWD1Q8N5C7 304 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 C1QTNF2Q9BXJ5 285 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 ULBP2Q9BZM5 246 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 PAQR5Q9NXK6 330 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 CXXC1Q9P0U4 656 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF443Q9Y2A4 671 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 PHRF1Q9P1Y6 1649 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 SCRG1O75711 98 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 TSPAN15O95858 294 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 DCNP07585 359 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 BMP2P12643 396 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 CPMP14384 443 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 PROX2Q3B8N5 592 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 PIANPQ8IYJ0 282 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 MMP21Q8N119 569 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 GDPD1Q8N9F7 314 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 FAM174AQ8TBP5 190 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 PPIL3Q9H2H8 161 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 PRSS21Q9Y6M0 314 aa17.05■□□□□ 0.32
SFSWAP-203ENST00000535236 RICTORQ6R327 1708 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 ZNF736B4DX44 427 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 B4DXG7 233 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 GALR3O60755 368 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 SLC22A5O76082 557 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 C1orf105O95561 183 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 RPS17P08708 135 aaKnown RBP17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 HIST1H1TP22492 207 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 RPS5P46782 204 aaKnown RBP17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 GABRA2P47869 451 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 CX3CR1P49238 355 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 EFNA3P52797 238 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 RAB5BP61020 215 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 TECPR1Q7Z6L1 1165 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 MSI2Q96DH6 328 aaKnown RBP17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 TCTN2Q96GX1 697 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 OR7D2Q96RA2 312 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 PDLIM7Q9NR12 457 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 PRMT8Q9NR22 394 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 SDHAF2Q9NX18 166 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 WDR37Q9Y2I8 494 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 CDC14CA4D256 554 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 CBX7O95931 251 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 DLSTP36957 453 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 DCTP40126 519 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 RRAS2P62070 204 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 ZP2Q05996 745 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 KRBOX4Q5JUW0 171 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 WDR53Q7Z5U6 358 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 SERPINA11Q86U17 422 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 SLC7A13Q8TCU3 470 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 NTMT1Q9BV86 223 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 ACPTQ9BZG2 426 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 OR2B2Q9GZK3 357 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 GABRR3A8MPY1 467 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 PTGER1P34995 402 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 PRLHRP49683 370 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 HOXC5Q00444 222 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 GPR139Q6DWJ6 353 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 OR5M10Q6IEU7 315 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 PNPLA1Q8N8W4 532 aa17.04■□□□□ 0.32
SFSWAP-203ENST00000535236 TRAPPC2LH3BP13 241 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms