RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 HMGN4O00479 90 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 SCDO00767 359 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 ADAMDEC1O15204 470 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 RAMP1O60894 148 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 CYP7B1O75881 506 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 PLAUP00749 431 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 CHRM4P08173 479 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 PRKCAP17252 672 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 MVDP53602 400 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 ATP12AP54707 1039 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 SKP2Q13309 424 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 DAZAP2Q15038 168 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-215ENST00000533946 TMEM176BQ3YBM2 270 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-215ENST00000533946 VPS26BQ4G0F5 336 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 SAXO2Q658L1 398 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 HEPHL1Q6MZM0 1159 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 ZCCHC12Q6PEW1 402 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 FRRS1Q6ZNA5 592 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 RNF130Q86XS8 419 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 KRTAP1-3Q8IUG1 177 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 LILRA2Q8N149 483 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 MEIOBQ8N635 442 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 ZNF527Q8NB42 609 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 CHDHQ8NE62 594 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-215ENST00000533946 OR56A1Q8NGH5 318 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 XAGE5Q8WWM1 108 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 CNOT9Q92600 299 aaKnown RBP8.61□□□□□ -1.03
SSBP3-215ENST00000533946 ZNF75CPQ92670 426 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-215ENST00000533946 OSTF1Q92882 214 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 VPS33AQ96AX1 596 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 THOC1Q96FV9 657 aaKnown RBP8.61□□□□□ -1.03
SSBP3-215ENST00000533946 EBF4Q9BQW3 602 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 THUMPD3Q9BV44 507 aaKnown RBP8.61□□□□□ -1.03
SSBP3-215ENST00000533946 SFXN3Q9BWM7 321 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 C12orf49Q9H741 205 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 PTGES2Q9H7Z7 377 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 SDHAF3Q9NRP4 125 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 RYDENQ9NUL5 291 aaKnown RBP8.61□□□□□ -1.03
SSBP3-215ENST00000533946 ST6GALNAC2Q9UJ37 374 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 PACSIN3Q9UKS6 424 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 FAF1Q9UNN5 650 aaPredicted RBP8.61□□□□□ -1.03
SSBP3-215ENST00000533946 CHST2Q9Y4C5 530 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 TESMINQ9Y4I5 508 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 ACTL7BQ9Y614 415 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 AP4B1Q9Y6B7 739 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 CADP27708 2225 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 PRSS51A0A1B0GVH4 220 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 A0A1W2PQD3 144 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 SH3D21A4FU49 640 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 SERINC4A6NH21 518 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 CCDC154A6NI56 674 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 RNASET2O00584 256 aaKnown RBP8.6□□□□□ -1.03
SSBP3-215ENST00000533946 DIAPH2O60879 1101 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 NUDT7P0C024 238 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 UBTFL6P0CB48 400 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-215ENST00000533946 CPA2P48052 419 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 CCR4P51679 360 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 PSMD4P55036 377 aaKnown RBP8.6□□□□□ -1.03
SSBP3-215ENST00000533946 FOXG1P55316 489 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-215ENST00000533946 QPRTQ15274 297 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 SGCBQ16585 318 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 ARHGAP11BQ3KRB8 267 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 LSM12Q3MHD2 195 aaKnown RBP8.6□□□□□ -1.03
SSBP3-215ENST00000533946 GLYR1Q49A26 553 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-215ENST00000533946 HBMQ6B0K9 141 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 OGFOD2Q6N063 350 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 COMTD1Q86VU5 262 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 CNPY4Q8N129 248 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 OR2V1Q8NHB1 315 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 FAM222BQ8WU58 562 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 ROPN1LQ96C74 230 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 CCDC115Q96NT0 180 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 SLC35A5Q9BS91 424 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 OR11A1Q9GZK7 315 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 ZNF350Q9GZX5 532 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 GSX1Q9H4S2 264 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-215ENST00000533946 MANSC1Q9H8J5 431 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 RLIMQ9NVW2 624 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 SLAMF8Q9P0V8 285 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 MRTO4Q9UKD2 239 aaKnown RBP8.6□□□□□ -1.03
SSBP3-215ENST00000533946 DTNAQ9Y4J8 743 aa8.6□□□□□ -1.03
SSBP3-215ENST00000533946 RAI1Q7Z5J4 1906 aaPredicted RBP8.6□□□□□ -1.03
SSBP3-215ENST00000533946 C7orf72A4D263 438 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 TTC36A6NLP5 189 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 FAM47E-STBD1D6RA91 191 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 E9PBE3 544 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 GTPBP1O00178 669 aaKnown RBP8.59□□□□□ -1.03
SSBP3-215ENST00000533946 MSTNO14793 375 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 HDAC3O15379 428 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 SASH3O75995 380 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 ATE1O95260 518 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 NUDT14O95848 222 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 PRG2P13727 222 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 ETFAP13804 333 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 CCNA2P20248 432 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 CAPN3P20807 821 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 ATP6V1C1P21283 382 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 UQCRC2P22695 453 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 S100A3P33764 101 aa8.59□□□□□ -1.03
SSBP3-215ENST00000533946 RYKP34925 604 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms