RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 ZMIZ1Q9ULJ6 1067 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 PCDHGA9Q9Y5G4 932 aaKnown RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ENPP4Q9Y6X5 453 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ACACBO00763 2458 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 LAMA5O15230 3695 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 K7EM74 188 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 EIF4E2O60573 245 aaKnown RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 PDGFAP04085 211 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 LINGO3P0C6S8 592 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 CNR1P21554 472 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ACAA2P42765 397 aaKnown RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 TNFSF10P50591 281 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 GANABQ14697 944 aaKnown RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 TMEM81Q6P7N7 255 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 AAGABQ6PD74 315 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 LSRQ86X29 649 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF440Q8IYI8 595 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 CADM2Q8N3J6 435 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ZADH2Q8N4Q0 377 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 OR4K17Q8NGC6 315 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 SNRNP27Q8WVK2 155 aaKnown RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 LRTOMTQ8WZ04 291 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF300Q96RE9 604 aaPredicted RBP17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ARMC1Q9NVT9 282 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 ICAM5Q9UMF0 924 aa17.37■□□□□ 0.37
SMPD1-205ENST00000531303 PINLYPA6NC86 204 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 ANKRD33BA6NCL7 494 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 B4DXG7 233 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 HNRNPRO43390 633 aaKnown RBP17.36■□□□□ 0.37
SMPD1-205ENST00000531303 SNX4O95219 450 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 ITGA2P17301 1181 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 TCEA1P23193 301 aaKnown RBP17.36■□□□□ 0.37
SMPD1-205ENST00000531303 HTR2AP28223 471 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 EPS8Q12929 822 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 PIN1Q13526 163 aaPredicted RBP17.36■□□□□ 0.37
SMPD1-205ENST00000531303 IQCCQ4KMZ1 466 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF766Q5HY98 468 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 ENTPD8Q5MY95 495 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 PLEKHM3Q6ZWE6 761 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 GALNTL5Q7Z4T8 443 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 AMIGO2Q86SJ2 522 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 TSPYL5Q86VY4 417 aaPredicted RBP17.36■□□□□ 0.37
SMPD1-205ENST00000531303 SULF2Q8IWU5 870 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 WDSUB1Q8N9V3 476 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 TOR1AIP2Q8NFQ8 470 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 RNF217Q8TC41 542 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 TM9SF4Q92544 642 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 ABHD17AQ96GS6 310 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 EXOSC3Q9NQT5 275 aaKnown RBP17.36■□□□□ 0.37
SMPD1-205ENST00000531303 TUBA8Q9NY65 449 aaPredicted RBP17.36■□□□□ 0.37
SMPD1-205ENST00000531303 FBXL2Q9UKC9 423 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 TESMINQ9Y4I5 508 aa17.36■□□□□ 0.37
SMPD1-205ENST00000531303 FREM3P0C091 2139 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 CDK2AP1O14519 115 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 GNGT2O14610 69 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 PEX1O43933 1283 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 SEMA7AO75326 666 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 CST1P01037 141 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 ITGB2P05107 769 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 MAGEA2P43356 314 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 IDH2P48735 452 aaKnown RBP17.35■□□□□ 0.37
SMPD1-205ENST00000531303 P2RX1P51575 399 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 TAS2R41P59536 307 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 OR1Q1Q15612 314 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 C19orf48Q6RUI8 117 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 PIWIL3Q7Z3Z3 882 aaKnown RBP17.35■□□□□ 0.37
SMPD1-205ENST00000531303 CYP4Z1Q86W10 505 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 PLCZ1Q86YW0 608 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 OR2M3Q8NG83 312 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 OR1J4Q8NGS1 313 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 OR5W2Q8NH69 310 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF563Q8TA94 476 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 SLC39A7Q92504 469 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 GNRHR2Q96P88 292 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 PKP2Q99959 881 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 ZNF559Q9BR84 538 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 ARHGAP9Q9BRR9 750 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 MFRPQ9BY79 579 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 SEMA6AQ9H2E6 1030 aa17.35■□□□□ 0.37
SMPD1-205ENST00000531303 TESQ9UGI8 421 aaKnown RBP17.35■□□□□ 0.37
SMPD1-205ENST00000531303 KLF13Q9Y2Y9 288 aaPredicted RBP17.35■□□□□ 0.37
SMPD1-205ENST00000531303 SNPHO15079 494 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 MGRN1O60291 552 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 NME2P1O60361 137 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 TRIM3O75382 744 aaPredicted RBP17.34■□□□□ 0.37
SMPD1-205ENST00000531303 FAM87AP0C7U9 286 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 RHCEP18577 417 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 FUT4P22083 530 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 NME2P22392 152 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 FASP25445 335 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 RFC3P40938 356 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 SLC6A8P48029 635 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 COPZ1P61923 177 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 SPIBQ01892 262 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 PPP1R8Q12972 351 aaKnown RBP17.34■□□□□ 0.37
SMPD1-205ENST00000531303 CBFBQ13951 182 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 TOMM34Q15785 309 aaPredicted RBP17.34■□□□□ 0.37
SMPD1-205ENST00000531303 TIGD3Q6B0B8 471 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 OR2M7Q8NG81 312 aa17.34■□□□□ 0.37
SMPD1-205ENST00000531303 SLC35B4Q969S0 331 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms