RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	RUNX1T1	Q06455	604 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	SCN1B	Q07699	218 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	CAMK2B	Q13554	666 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	SERTAD2	Q14140	314 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	LARS2	Q15031	903 aa	Known RBP	13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	MLC1	Q15049	377 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	SPHAR	Q15513	63 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	BAK1	Q16611	211 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	C1orf189	Q5VU69	101 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	C18orf63	Q68DL7	685 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	XKRX	Q6PP77	449 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	QSOX2	Q6ZRP7	698 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	OVCH1	Q7RTY7	1134 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	LIX1L	Q8IVB5	337 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	ESX1	Q8N693	406 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	METTL27	Q8N6F8	245 aa	Predicted RBP	13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	CLDN22	Q8N7P3	220 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	GDPD1	Q8N9F7	314 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	PROKR2	Q8NFJ6	384 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	DHRS1	Q96LJ7	313 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	UCK2	Q9BZX2	261 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	MARCH7	Q9H992	704 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	NEUROD4	Q9HD90	331 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	EXOSC4	Q9NPD3	245 aa	Known RBP	13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	REV1	Q9UBZ9	1251 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	PADI1	Q9ULC6	663 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	MGAT4B	Q9UQ53	548 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540	WDR87	Q6ZQQ6	2873 aa		13.51	□□□□□ -0.25
NR1H3-231	ENST00000529540		A0A1W2PQ09	198 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	DCDC2B	A2VCK2	349 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540		A6NL46	340 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	FAM25A	B3EWG3	89 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	FAM25C	B3EWG5	89 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	FAM25G	B3EWG6	89 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	TPST2	O60704	377 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	CTNS	O60931	367 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	DXO	O77932	396 aa	Known RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	IFNW1	P05000	195 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	PSMA1	P25786	263 aa	Known RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	SNRPN	P63162	240 aa	Known RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	MC1R	Q01726	317 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	TP53BP2	Q13625	1128 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	CEBPE	Q15744	281 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	OCLN	Q16625	522 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	YIF1B	Q5BJH7	314 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	LAX1	Q8IWV1	398 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	VWA5B2	Q8N398	1253 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	NANOGP1	Q8N7R0	232 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC38A9	Q8NBW4	561 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	OR9Q1	Q8NGQ5	310 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	GRPEL2	Q8TAA5	225 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	APOBEC4	Q8WW27	367 aa	Known RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC46A1	Q96NT5	459 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	BBS4	Q96RK4	519 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	PRTFDC1	Q9NRG1	225 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	CES1P1	Q9UKY3	287 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	SSR3	Q9UNL2	185 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	RPL36	Q9Y3U8	105 aa	Known RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	PTPRZ1	P23471	2315 aa	Predicted RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	C9orf172	C9J069	976 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	STMND1	H3BQB6	276 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	TRIM3	O75382	744 aa	Predicted RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	GPR75	O95800	540 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	CSNK2A2	P19784	350 aa	Predicted RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	FRK	P42685	505 aa	Predicted RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	MAT1A	Q00266	395 aa	Known RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	STX4	Q12846	297 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	MFSD4B	Q5TF39	518 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	ANGPTL8	Q6UXH0	198 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	HSDL2	Q6YN16	418 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	NOXA1	Q86UR1	476 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	TAGAP	Q8N103	731 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	OR7G1	Q8NGA0	311 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	MR1	Q95460	341 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	TRIM63	Q969Q1	353 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	SLC25A46	Q96AG3	418 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	EXOSC8	Q96B26	276 aa	Known RBP	13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	TMEM246	Q9BRR3	403 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	MED18	Q9BUE0	208 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	ACSL6	Q9UKU0	697 aa		13.5	□□□□□ -0.25
NR1H3-231	ENST00000529540	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	RGS5	O15539	181 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	ERAL1	O75616	437 aa	Known RBP	13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	IFI6	P09912	130 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	POU2F1	P14859	743 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	ZNF28	P17035	718 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	HLA-DMA	P28067	261 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	SOX3	P41225	446 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	ZNF91	Q05481	1191 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	MPEG1	Q2M385	716 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	GPAT3	Q53EU6	434 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	ZMAT1	Q5H9K5	638 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	COX15	Q7KZN9	410 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	LRRC25	Q8N386	305 aa	Predicted RBP	13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	STT3B	Q8TCJ2	826 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	OR5P2	Q8WZ92	322 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	NXPE2	Q96DL1	559 aa		13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	TRMT61A	Q96FX7	289 aa	Known RBP	13.49	□□□□□ -0.25
NR1H3-231	ENST00000529540	MIXL1	Q9H2W2	232 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms