RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 TP53INP1Q96A56 240 aa11.35□□□□□ -0.59
PABPC1-219ENST00000522387 SPACA9Q96E40 222 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-219ENST00000522387 JSRP1Q96MG2 331 aaPredicted RBP11.35□□□□□ -0.59
PABPC1-219ENST00000522387 ZNF607Q96SK3 696 aa11.35□□□□□ -0.59
PABPC1-219ENST00000522387 THUMPD1Q9NXG2 353 aaKnown RBP11.35□□□□□ -0.59
PABPC1-219ENST00000522387 KLRF1Q9NZS2 232 aa11.35□□□□□ -0.59
PABPC1-219ENST00000522387 K7EM74 188 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 K7ENP7 123 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 PPM1BO75688 479 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 DIRAS1O95057 198 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 OXSR1O95747 527 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 IFI6P09912 130 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 GKN3PP0CG01 181 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CCL3P10147 92 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 PRKACGP22612 351 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 RFC3P40938 356 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CD97P48960 835 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 PCBP3P57721 371 aaKnown RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 VEZF1Q14119 521 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 LAPTM4AQ15012 233 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CD226Q15762 336 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 ZNF829Q3KNS6 432 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 INO80CQ6PI98 192 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 C19orf48Q6RUI8 117 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 KRT73Q86Y46 540 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 RBM45Q8IUH3 476 aaKnown RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 C17orf47Q8NEP4 570 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 PHOSPHO1Q8TCT1 267 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 GRHL3Q8TE85 626 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 KLHDC3Q9BQ90 382 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 MTHFD2LQ9H903 347 aaPredicted RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 LRFN1Q9P244 771 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 SPTA1P02549 2419 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 HEATR5AQ86XA9 2040 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 A0A0G2JPF8 293 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 HNRNPCL2B2RXH8 293 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 HNRNPCL3B7ZW38 293 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 M0R3H8 397 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 KIAA0513O60268 411 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 MFN2O95140 757 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 HNRNPCL4P0DMR1 293 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 EVI2BP34910 448 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 POLR2IP36954 125 aaKnown RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CD96P40200 585 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CYB561P49447 251 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CCR4P51679 360 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 PSMD4P55036 377 aaKnown RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CHRNB3Q05901 458 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 GNA13Q14344 377 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 FAM98BQ52LJ0 330 aaKnown RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CBLN3Q6UW01 205 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 LYPD8Q6UX82 237 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 PEX5LQ8IYB4 626 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 SPPL2AQ8TCT8 520 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 SLC47A1Q96FL8 570 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 TUBA1CQ9BQE3 449 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 BDH2Q9BUT1 245 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 TBL1XR1Q9BZK7 514 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 METTL7AQ9H8H3 244 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 MRTO4Q9UKD2 239 aaKnown RBP11.34□□□□□ -0.59
PABPC1-219ENST00000522387 AP3M1Q9Y2T2 418 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CHST2Q9Y4C5 530 aa11.34□□□□□ -0.59
PABPC1-219ENST00000522387 CACNA1BQ00975 2339 aa11.33□□□□□ -0.59
PABPC1-219ENST00000522387 TRIM64BA6NI03 449 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 AGAP5A6NIR3 686 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 H0YAE9 185 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 SCDO00767 359 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 TO15178 435 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 HS6ST1O60243 411 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 SERPINB7O75635 380 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 CST1P01037 141 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 RAP2AP10114 183 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 PTNP21246 168 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 EEF1B2P24534 225 aaKnown RBP11.33□□□□□ -0.6
PABPC1-219ENST00000522387 TMPRSS3P57727 454 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 ARG2P78540 354 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 MRPL2Q5T653 305 aaKnown RBP11.33□□□□□ -0.6
PABPC1-219ENST00000522387 H3F3CQ6NXT2 135 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 ZNF773Q6PK81 442 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 STK32CQ86UX6 486 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 LACC1Q8IV20 430 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 BBS10Q8TAM1 723 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 DUSP19Q8WTR2 217 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 APOBEC4Q8WW27 367 aaKnown RBP11.33□□□□□ -0.6
PABPC1-219ENST00000522387 HSH2DQ96JZ2 352 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 ZNF354BQ96LW1 612 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 SPATA9Q9BWV2 254 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.33□□□□□ -0.63e-8■□□□□ 8.7
PABPC1-219ENST00000522387 GORASP2Q9H8Y8 452 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 UBQLN4Q9NRR5 601 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 DCAF13Q9NV06 445 aaKnown RBP11.33□□□□□ -0.6
PABPC1-219ENST00000522387 CARD8Q9Y2G2 431 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 GPC6Q9Y625 555 aaPredicted RBP11.33□□□□□ -0.6
PABPC1-219ENST00000522387 SVILO95425 2214 aa11.33□□□□□ -0.6
PABPC1-219ENST00000522387 A0A0G2JMM0 328 aa11.32□□□□□ -0.6
PABPC1-219ENST00000522387 A0A1W2PPB8 328 aa11.32□□□□□ -0.6
PABPC1-219ENST00000522387 A0A1W2PRS3 328 aa11.32□□□□□ -0.6
PABPC1-219ENST00000522387 KIR3DP1A8MWS1 328 aa11.32□□□□□ -0.6
PABPC1-219ENST00000522387 TMEM229AB2RXF0 380 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms