RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 ZNF417Q8TAU3 575 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 C22orf15Q8WYQ4 148 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 ZMYND19Q96E35 227 aaPredicted RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 CDC6Q99741 560 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 GHRLQ9UBU3 117 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 REV1Q9UBZ9 1251 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 TRIM64BA6NI03 449 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 FBP2O00757 339 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 H2AFB2P0C5Z0 115 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 SRFP11831 508 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 PTPRRQ15256 657 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 CNN3Q15417 329 aaKnown RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 IQCF1Q8N6M8 205 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 COQ8AQ8NI60 647 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 BCL7BQ9BQE9 202 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 RANBP3Q9H6Z4 567 aaPredicted RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 GPR83Q9NYM4 423 aa15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 TESQ9UGI8 421 aaKnown RBP15.23■□□□□ 0.03
PCDHA3-201ENST00000522353 COL16A1Q07092 1604 aaPredicted RBP15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 SMCO3A2RU48 225 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 AGAP5A6NIR3 686 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 SLC43A1O75387 559 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 TMEM151AQ8N4L1 468 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 OR5H2Q8NGV7 314 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 TBC1D15Q8TC07 691 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 ADAMTS16Q8TE57 1224 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 CD93Q9NPY3 652 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 VAPAQ9P0L0 249 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 POLHQ9Y253 713 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 WIF1Q9Y5W5 379 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 ST14Q9Y5Y6 855 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 SLC22A7Q9Y694 548 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 DNAJB6O75190 326 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 ETV4P43268 484 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 MBTPS1Q14703 1052 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 RHEBQ15382 184 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF77Q15935 545 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 TBRG1Q3YBR2 411 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 TXNDC15Q96J42 360 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 C1QTNF2Q9BXJ5 285 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 IMPA1P29218 277 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 ZFP41Q8N8Y5 198 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 CCDC86Q9H6F5 360 aaKnown RBP15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 TMEM165Q9HC07 324 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 TMEM265A0A087WTH1 108 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 FAM171A2A8MVW0 826 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 KLRC4-KLRK1H3BQV0 150 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 IFNA2P01563 188 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 RAB3AP20336 220 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 ARF1P84077 181 aaKnown RBP15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 PROX2Q3B8N5 592 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 IGFN1Q86VF2 1251 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 ZADH2Q8N4Q0 377 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 OR9Q2Q8NGE9 314 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 CPT1CQ8TCG5 803 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 CHPT1Q8WUD6 406 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 ALG8Q9BVK2 526 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF226Q9NYT6 803 aa15.22■□□□□ 0.03
PCDHA3-201ENST00000522353 OR5K3A6NET4 321 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 YY2O15391 372 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 ERVK-25P63136 954 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF534Q76KX8 674 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 CCDC71LQ8N9Z2 235 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 MRI1Q9BV20 369 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF443Q9Y2A4 671 aaPredicted RBP15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 MYH6P13533 1939 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 CNOT4O95628 575 aaKnown RBP15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 CHRM4P08173 479 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 SLC2A5P22732 501 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 UQCRC1P31930 480 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 MAT1AQ00266 395 aaKnown RBP15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 BIRC8Q96P09 236 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 ZNF587Q96SQ5 575 aaPredicted RBP15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 CCDC32Q9BV29 185 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 PBX4Q9BYU1 374 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 DCAF13Q9NV06 445 aaKnown RBP15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 GLULP15104 373 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 POU3F1Q03052 451 aaPredicted RBP15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 BCL7AQ4VC05 210 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 CCNJQ5T5M9 372 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 GDPGP1Q6ZNW5 385 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 CMTM1Q8IZ96 169 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 FUNDC2Q9BWH2 189 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 CXXC1Q9P0U4 656 aaPredicted RBP15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 B3GNT3Q9Y2A9 372 aa15.21■□□□□ 0.03
PCDHA3-201ENST00000522353 C4AP0C0L4 1744 aa15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 F5H0A9 414 aaPredicted RBP15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 CREBL2O60519 120 aaPredicted RBP15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 HMGA1P17096 107 aaKnown RBP15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 FGL1Q08830 312 aa15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 TMEM176BQ3YBM2 270 aaPredicted RBP15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 OR5M10Q6IEU7 315 aa15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 ZNF610Q8N9Z0 462 aa15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 SDR9C7Q8NEX9 313 aa15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 ZNF597Q96LX8 424 aa15.21■□□□□ 0.02
PCDHA3-201ENST00000522353 IGLV3-10A0A075B6K4 115 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 SLC16A7O60669 478 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 ATP6V1G1O75348 118 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 GPX3P22352 226 aa15.2■□□□□ 0.02
PCDHA3-201ENST00000522353 FNTBP49356 437 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms