RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ZFYVE21Q9BQ24 234 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MGME1Q9BQP7 344 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PIGQQ9BRB3 760 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM208Q9BTX3 173 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF426Q9BUY5 554 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MRI1Q9BV20 369 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CNPPD1Q9BV87 410 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SYT4Q9H2B2 425 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CDIP1Q9H305 208 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRDM12Q9H4Q4 367 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 EPHX3Q9H6B9 360 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SMURF2Q9HAU4 748 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 NOX3Q9HBY0 568 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 EXOSC4Q9NPD3 245 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SNTG1Q9NSN8 517 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MAN2C1Q9NTJ4 1040 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CLN6Q9NWW5 311 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MYOTQ9UBF9 498 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CLEC2DQ9UHP7 191 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZDHHC2Q9UIJ5 367 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 AJAP1Q9UKB5 411 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 NDRG2Q9UN36 371 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SLC27A6Q9Y2P4 619 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 STARD10Q9Y365 291 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 COQ4Q9Y3A0 265 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 MRPS18CQ9Y3D5 142 aaKnown RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ATG4BQ9Y4P1 393 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 LAMB2P55268 1798 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 KDM3BQ7LBC6 1761 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 SCN11AQ9UI33 1791 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 KIDINS220Q9ULH0 1771 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 DLEC1Q9Y238 1755 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CICQ96RK0 1608 aaPredicted RBP4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 CHD5Q8TDI0 1954 aa4.49□□□□□ -1.69
HMGB1P19-201ENST00000517578 ASTN1O14525 1302 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 BCORQ6W2J9 1755 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A087X1B8 175 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 A0A1B0GUH1 482 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 KANTRA0A1W2PQU2 76 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 TCRBV5S4A2TA0A5A2 114 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 UBA6A0AVT1 1052 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 UBE2QL1A1L167 161 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 C20orf202A1L168 122 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SMCO3A2RU48 225 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 LRIT2A6NDA9 550 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 C5orf51A6NDU8 294 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 IQCF5A8MTL0 148 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NR5A2O00482 541 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 PPP1R2P9O14990 202 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NPC1O15118 1278 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 LDLRAD4O15165 306 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 CYTIPO60759 359 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SMPD2O60906 423 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF821O75541 412 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2A4O95047 310 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 C6orf47O95873 294 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 TFP02787 698 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 IL5P05113 134 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 THP07101 528 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 TYRP1P17643 537 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 GABRB1P18505 474 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 GGT1P19440 569 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 LPOP22079 712 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 AZGP1P25311 298 aaKnown RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 YWHAQP27348 245 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 PSMB6P28072 239 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NDUFS1P28331 727 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 HSD11B1P28845 292 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 MAS1LP35410 378 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 THBS2P35442 1172 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 PRKAG1P54619 331 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 DLX5P56178 289 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 OR2B8PP59922 312 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 MRPS11P82912 194 aaKnown RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 FPGSQ05932 587 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ITKQ08881 620 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM115Q12893 351 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NPRL3Q12980 569 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 MLLT11Q13015 90 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 SRSF5Q13243 272 aaKnown RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 GRM3Q14832 879 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 GRM4Q14833 912 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NDUFA9Q16795 377 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ATP6V1FQ16864 119 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 GSG1Q2KHT4 349 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 GOLGA7BQ2TAP0 167 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 C1orf141Q5JVX7 400 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 BCL2L15Q5TBC7 163 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NKAIN2Q5VXU1 208 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 NSUN5P2Q63ZY6 315 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM198Q66K66 360 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 CYB5R2Q6BCY4 276 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 FBXO42Q6P3S6 717 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 TMEM88Q6PEY1 159 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 CD300LGQ6UXG3 332 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 CLEC9AQ6UXN8 241 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 ZNF730Q6ZMV8 503 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 MEX3BQ6ZN04 569 aaKnown RBP4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 MON1BQ7L1V2 547 aa4.48□□□□□ -1.69
HMGB1P19-201ENST00000517578 DNAJB7Q7Z6W7 309 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms