RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 INTS12Q96CB8 462 aaKnown RBP12.21□□□□□ -0.45
SNF8-206ENST00000509989 ADGRG7Q96K78 797 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 PINK1Q9BXM7 581 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 HOXD1Q9GZZ0 328 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 ACBD3Q9H3P7 528 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 EXD2Q9NVH0 621 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 CHST2Q9Y4C5 530 aa12.21□□□□□ -0.45
SNF8-206ENST00000509989 A0A096LPI6 279 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 GTPBP1O00178 669 aaKnown RBP12.2□□□□□ -0.46
SNF8-206ENST00000509989 ZNF264O43296 627 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 AQP8O94778 261 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 ANP32DO95626 131 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 NUDT14O95848 222 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 TFPTP0C1Z6 253 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 UBL4AP11441 157 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 PRKCAP17252 672 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 MSX1P28360 303 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 TIMP3P35625 211 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 CRATP43155 626 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 ATP4BP51164 291 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 P2RX1P51575 399 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 CCR4P51679 360 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 GYS2P54840 703 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 QPRTQ15274 297 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 LRIF1Q5T3J3 769 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 AP1ARQ63HQ0 302 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 AAGABQ6PD74 315 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 DLEU7Q6UYE1 221 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 MSANTD1Q6ZTZ1 278 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 MTERF4Q7Z6M4 381 aaKnown RBP12.2□□□□□ -0.46
SNF8-206ENST00000509989 VRK2Q86Y07 508 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 EID3Q8N140 333 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 GTPBP8Q8N3Z3 284 aaPredicted RBP12.2□□□□□ -0.46
SNF8-206ENST00000509989 TMCO5AQ8N6Q1 288 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 TRIML2Q8N7C3 387 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 FAM71CQ8NEG0 241 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 ATP6V1C2Q8NEY4 427 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 FNDC9Q8TBE3 224 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 SLC38A5Q8WUX1 472 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 DNAJA3Q96EY1 480 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 PIGQQ9BRB3 760 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 CALHM2Q9HA72 323 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 PRR14LQ5THK1 2151 aa12.2□□□□□ -0.46
SNF8-206ENST00000509989 TEX15Q9BXT5 2789 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 CLIC1O00299 241 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 FBP2O00757 339 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 EIF1AYO14602 144 aaKnown RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 TNFSF11O14788 317 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 NTN1O95631 604 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 AK1P00568 194 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 CSTAP01040 98 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 BCHEP06276 602 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 VIMP08670 466 aaKnown RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 HOXD4P09016 255 aaPredicted RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 NR2F1P10589 423 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 IGFBP2P18065 325 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 RPS4Y1P22090 263 aaKnown RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 RYKP34925 604 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 SFTPDP35247 375 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 PTGER4P35408 488 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 MDH1P40925 334 aaKnown RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 KRTAP10-9P60411 292 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 DSTNP60981 165 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 RGNQ15493 299 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 BCL2A1Q16548 175 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 GLYR1Q49A26 553 aaPredicted RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 ATAD3BQ5T9A4 648 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 VWA1Q6PCB0 445 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 MEX3BQ6ZN04 569 aaKnown RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 COMTD1Q86VU5 262 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 ZNF527Q8NB42 609 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 TMEM19Q96HH6 336 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 ZNF317Q96PQ6 595 aaPredicted RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 TRNT1Q96Q11 434 aaKnown RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 SRXN1Q9BYN0 137 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 LAT2Q9GZY6 243 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 ENKD1Q9H0I2 346 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 RMND5AQ9H871 391 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 KCNJ16Q9NPI9 418 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 RLIMQ9NVW2 624 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 LRBAP50851 2863 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 HRNRQ86YZ3 2850 aaPredicted RBP12.19□□□□□ -0.46
SNF8-206ENST00000509989 PDZD2O15018 2839 aa12.19□□□□□ -0.46
SNF8-206ENST00000509989 NOTCH2Q04721 2471 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 C7orf72A4D263 438 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 AGAP5A6NIR3 686 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 HSPB2A8KAH6 182 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 CXCL13O43927 109 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 DNAJA2O60884 412 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 TNFSF13O75888 250 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 KRT75O95678 551 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 IL2RAP01589 272 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 TMIGD3P0DMS9 266 aaPredicted RBP12.18□□□□□ -0.46
SNF8-206ENST00000509989 ZNF17P17021 662 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 GCKP35557 465 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 ZNF41P51814 821 aaPredicted RBP12.18□□□□□ -0.46
SNF8-206ENST00000509989 SESN3P58005 492 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 KCNJ10P78508 379 aa12.18□□□□□ -0.46
SNF8-206ENST00000509989 PON3Q15166 354 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms