RNA–Protein interactions for RNA: ENST00000507002.5

SIL1-209, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 3

Gene SIL1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-209ENST00000507002 ELP5Q8TE02 316 aa11.57□□□□□ -0.56
SIL1-209ENST00000507002 GRHL3Q8TE85 626 aa11.57□□□□□ -0.56
SIL1-209ENST00000507002 FBLIM1Q8WUP2 373 aa11.57□□□□□ -0.56
SIL1-209ENST00000507002 TMEM255BQ8WV15 326 aa11.57□□□□□ -0.56
SIL1-209ENST00000507002 IMMP1LQ96LU5 166 aa11.57□□□□□ -0.56
SIL1-209ENST00000507002 YTHDF1Q9BYJ9 559 aaKnown RBP11.57□□□□□ -0.56
SIL1-209ENST00000507002 DEFB126Q9BYW3 111 aa11.57□□□□□ -0.56
SIL1-209ENST00000507002 ZBTB20Q9HC78 741 aaPredicted RBP11.57□□□□□ -0.56
SIL1-209ENST00000507002 EXOSC3Q9NQT5 275 aaKnown RBP11.57□□□□□ -0.56
SIL1-209ENST00000507002 RPS6KB2Q9UBS0 482 aa11.57□□□□□ -0.56
SIL1-209ENST00000507002 TCFL5Q9UL49 500 aa11.57□□□□□ -0.56
SIL1-209ENST00000507002 FARSAQ9Y285 508 aaKnown RBP11.57□□□□□ -0.56
SIL1-209ENST00000507002 HSPE1-MOB4S4R3N1 261 aa11.57□□□□□ -0.56
SIL1-209ENST00000507002 A0A1W2PQ72 361 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 ZAR1LA6NP61 321 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 ALG1L2C9J202 215 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 ZNF264O43296 627 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 CHP2O43745 196 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 PIP5K1CO60331 668 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 FADS1O60427 444 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 ZNF354AO60765 605 aaPredicted RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 SOX14O95416 240 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 TP53P04637 393 aaPredicted RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 NAGAP17050 411 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 ENDOUP21128 410 aaKnown RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 GSTM3P21266 225 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 CHMP24386 653 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 POU1F1P28069 291 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 ELK4P28324 431 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 OTX2P32243 289 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 OMPP47874 163 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 GSSP48637 474 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 RPS15P62841 145 aaKnown RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 ALDH6A1Q02252 535 aaKnown RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 COX10Q12887 443 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 MEP1AQ16819 746 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 C6orf141Q5SZD1 244 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 PLAG1Q6DJT9 500 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 NDUFAF7Q7L592 441 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 CCDC71Q8IV32 467 aaPredicted RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 NRMQ8IXM6 262 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 CACTIN-AS1Q8N1I8 211 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 TMCO5AQ8N6Q1 288 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 LSMEM1Q8N8F7 131 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 NLGN4YQ8NFZ3 816 aaPredicted RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 M1APQ8TC57 530 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 SLC22A8Q8TCC7 542 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 HDAC2Q92769 488 aaKnown RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 FAM46AQ96IP4 442 aaKnown RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 GPA33Q99795 319 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 MRPS26Q9BYN8 205 aaKnown RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 TBL1XR1Q9BZK7 514 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 B3GNT4Q9C0J1 378 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 LAT2Q9GZY6 243 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 MMP25Q9NPA2 562 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 KRCC1Q9NPI7 259 aaPredicted RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 BATF3Q9NR55 127 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 SELENONQ9NZV5 590 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 MYOTQ9UBF9 498 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 CARD8Q9Y2G2 431 aa11.56□□□□□ -0.56
SIL1-209ENST00000507002 CNOT1A5YKK6 2376 aaKnown RBP11.56□□□□□ -0.56
SIL1-209ENST00000507002 RIF1Q5UIP0 2472 aaKnown RBP11.55□□□□□ -0.56
SIL1-209ENST00000507002 NSG1A0A0A6YYJ2 146 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 PROB1E7EW31 1015 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 KLF4O43474 513 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 NDUFB5O43674 189 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 SCO2O43819 266 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 RAD1O60671 282 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 SMNDC1O75940 238 aaKnown RBP eCLIP11.55□□□□□ -0.56
SIL1-209ENST00000507002 OR6B1O95007 311 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 CELA2AP08217 269 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 IGFBP1P08833 259 aaPredicted RBP11.55□□□□□ -0.56
SIL1-209ENST00000507002 LINGO3P0C6S8 592 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 PTNP21246 168 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 FPR3P25089 353 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 EVI2BP34910 448 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 STAT5AP42229 794 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 GPR4P46093 362 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 SLC6A8P48029 635 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 CCR4P51679 360 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 FBXW4P57775 412 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 COPZ1P61923 177 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 TSPAN31Q12999 210 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 CDK5R2Q13319 367 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 TOP3AQ13472 1001 aaPredicted RBP11.55□□□□□ -0.56
SIL1-209ENST00000507002 APOFQ13790 326 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 SSPNQ14714 243 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 MAD2L1BPQ15013 274 aaPredicted RBP11.55□□□□□ -0.56
SIL1-209ENST00000507002 PTGES3Q15185 160 aaKnown RBP11.55□□□□□ -0.56
SIL1-209ENST00000507002 ALG10BQ5I7T1 473 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 RBM48Q5RL73 367 aaKnown RBP11.55□□□□□ -0.56
SIL1-209ENST00000507002 LAIR2Q6ISS4 152 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 ULK3Q6PHR2 472 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 LYPD8Q6UX82 237 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 MARCH3Q86UD3 253 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 RNF113BQ8IZP6 322 aaKnown RBP11.55□□□□□ -0.56
SIL1-209ENST00000507002 CNIH3Q8TBE1 160 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 FAM81AQ8TBF8 368 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 TMEM239Q8WW34 195 aa11.55□□□□□ -0.56
SIL1-209ENST00000507002 HGDQ93099 445 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms