RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 IGFBP2P18065 325 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 CDKN2CP42773 168 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 ZNF117Q03924 483 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 SQLEQ14534 574 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 ZSWIM7Q19AV6 140 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 TIGD2Q4W5G0 525 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.48□□□□□ -0.89
FXR1-222ENST00000498658 PDZK1Q5T2W1 519 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 TYW3Q6IPR3 259 aaKnown RBP9.48□□□□□ -0.89
FXR1-222ENST00000498658 LRRC74BQ6ZQY2 392 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 ESPNLQ6ZVH7 1005 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 KIF18BQ86Y91 864 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 DMRTC2Q8IXT2 367 aaPredicted RBP9.48□□□□□ -0.89
FXR1-222ENST00000498658 CMIPQ8IY22 773 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 METTL25Q8N6Q8 603 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 C9orf106Q8NAJ2 232 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 NAXEQ8NCW5 288 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 OR5M1Q8NGP8 315 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 ZFP90Q8TF47 636 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 TMEM234Q8WY98 164 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 RAB8BQ92930 207 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 RNASE6Q93091 150 aaKnown RBP9.48□□□□□ -0.89
FXR1-222ENST00000498658 ARSGQ96EG1 525 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 MRGPRX4Q96LA9 322 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 RNF145Q96MT1 663 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 EBF4Q9BQW3 602 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 LAT2Q9GZY6 243 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 MTHFD2LQ9H903 347 aaPredicted RBP9.48□□□□□ -0.89
FXR1-222ENST00000498658 TPT1P8Q9HAU6 139 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 CACYBPQ9HB71 228 aaKnown RBP9.48□□□□□ -0.89
FXR1-222ENST00000498658 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.48□□□□□ -0.89
FXR1-222ENST00000498658 P2RX2Q9UBL9 471 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 KCNN3Q9UGI6 736 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 PRDM4Q9UKN5 801 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 MKLN1Q9UL63 735 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 MCTS1Q9ULC4 181 aaKnown RBP9.48□□□□□ -0.89
FXR1-222ENST00000498658 CARD8Q9Y2G2 431 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 PKDREJQ9NTG1 2253 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 PCNX3Q9H6A9 2034 aa9.48□□□□□ -0.89
FXR1-222ENST00000498658 ITPR2Q14571 2701 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 DOCK7Q96N67 2140 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 CACNA1DQ01668 2161 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 MED12Q93074 2177 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 NPIPA5A0A0B4J1W7 369 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 NPIPA7E9PJI5 369 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 EIF1AYO14602 144 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 ADAMDEC1O15204 470 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 ATP8B1O43520 1251 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 EDF1O60869 148 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 SYNGR4O95473 234 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 H6PDO95479 791 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 GSNP06396 782 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 PABPC4LP0CB38 370 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 NPIPA8P0DM63 369 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 NR2F1P10589 423 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 UQCRBP14927 111 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 PGCP20142 388 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 PPIBP23284 216 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 PSMA4P25789 261 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 FKBP2P26885 142 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 CRATP43155 626 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 SLC6A8P48029 635 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 CCR4P51679 360 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 SUCLG1P53597 346 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 CASP9P55211 416 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 CLDN15P56746 228 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 METTL21CQ5VZV1 264 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 GTF2IRD2BQ6EKJ0 949 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 BLOC1S3Q6QNY0 202 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 CBLN3Q6UW01 205 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 GTF2IRD2Q86UP8 949 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 GGNQ86UU5 652 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 TMCO5AQ8N6Q1 288 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 OR9I1Q8NGQ6 314 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 GPR119Q8TDV5 335 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 ST8SIA1Q92185 356 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 SMPDL3BQ92485 455 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 GTF2H4Q92759 462 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 VPS33AQ96AX1 596 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 INTS12Q96CB8 462 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 SPDL1Q96EA4 605 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 PINK1Q9BXM7 581 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 PRRG4Q9BZD6 226 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 EXOSC3Q9NQT5 275 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 SERINC1Q9NRX5 453 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 CCDC167Q9P0B6 97 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 PACSIN3Q9UKS6 424 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 NOTCH2Q04721 2471 aa9.47□□□□□ -0.89
FXR1-222ENST00000498658 INTS1Q8N201 2190 aaKnown RBP9.47□□□□□ -0.89
FXR1-222ENST00000498658 A0A096LPI6 279 aa9.46□□□□□ -0.9
FXR1-222ENST00000498658 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.46□□□□□ -0.9
FXR1-222ENST00000498658 AGAP5A6NIR3 686 aa9.46□□□□□ -0.9
FXR1-222ENST00000498658 CYSRT1A8MQ03 144 aa9.46□□□□□ -0.9
FXR1-222ENST00000498658 KDM4EB2RXH2 506 aaPredicted RBP9.46□□□□□ -0.9
FXR1-222ENST00000498658 EEF1E1-BLOC1S5C9J1V9 151 aa9.46□□□□□ -0.9
FXR1-222ENST00000498658 EEF1E1O43324 174 aaKnown RBP9.46□□□□□ -0.9
FXR1-222ENST00000498658 DNAJA2O60884 412 aa9.46□□□□□ -0.9
FXR1-222ENST00000498658 CYP7B1O75881 506 aa9.46□□□□□ -0.9
FXR1-222ENST00000498658 TGM6O95932 706 aa9.46□□□□□ -0.9
FXR1-222ENST00000498658 DBIP07108 87 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms