RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 MLIPQ5VWP3 458 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 KHDRBS2Q5VWX1 349 aaKnown RBP10.89□□□□□ -0.67
PBX1-211ENST00000498497 OR2A2Q6IF42 318 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 SCD5Q86SK9 330 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 GTPBP8Q8N3Z3 284 aaPredicted RBP10.89□□□□□ -0.67
PBX1-211ENST00000498497 CPNE4Q96A23 557 aaPredicted RBP10.89□□□□□ -0.67
PBX1-211ENST00000498497 AARSD1Q9BTE6 412 aaKnown RBP10.89□□□□□ -0.67
PBX1-211ENST00000498497 ACPTQ9BZG2 426 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 FN3KRPQ9HA64 309 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 FTSJ1Q9UET6 329 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 AK6Q9Y3D8 172 aaKnown RBP10.89□□□□□ -0.67
PBX1-211ENST00000498497 RANBP2P49792 3224 aaKnown RBP10.89□□□□□ -0.67
PBX1-211ENST00000498497 TRBV5-3A0A0A0MS03 114 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.89□□□□□ -0.67
PBX1-211ENST00000498497 UBE2QL1A1L167 161 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 LRRN3E7EW58 273 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 PDYNP01213 254 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 SDC1P18827 310 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 GABRA5P31644 462 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 ARL2P36404 184 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 GAB1Q13480 694 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 TCEAL6Q6IPX3 200 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 SFXN4Q6P4A7 337 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 ZNF836Q6ZNA1 936 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 OAFQ86UD1 273 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 FAM129CQ86XR2 697 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 PIANPQ8IYJ0 282 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 FAM26EQ8N5C1 309 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 CAMKVQ8NCB2 501 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 Q8NFD4 153 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 OR4E2Q8NGC2 313 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 OR51G2Q8NGK0 314 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 ZNF382Q96SR6 550 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 NKX3-1Q99801 234 aaPredicted RBP10.89□□□□□ -0.67
PBX1-211ENST00000498497 ZNF350Q9GZX5 532 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 LRRN3Q9H3W5 708 aa10.89□□□□□ -0.67
PBX1-211ENST00000498497 H2AFY2Q9P0M6 372 aaPredicted RBP10.89□□□□□ -0.67
PBX1-211ENST00000498497 CHD3Q12873 2000 aaKnown RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 A0A1W2PPE2 198 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 MED19A0JLT2 244 aaPredicted RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 AP4M1O00189 453 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 LILRB5O75023 590 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 IGFBP6P24592 240 aaPredicted RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 LSM6P62312 80 aaKnown RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 GPRIN1Q7Z2K8 1008 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 CEACAM19Q7Z692 300 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 POGLUT1Q8NBL1 392 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 OR6K2Q8NGY2 324 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 NRSN2Q9GZP1 204 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 MED9Q9NWA0 146 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 MRPL22Q9NWU5 206 aaKnown RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 RASL12Q9NYN1 266 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 HECAQ9UBI9 543 aaPredicted RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 DNAH14Q0VDD8 3507 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 OTCP00480 354 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 GIPP09681 153 aaPredicted RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 MAP3K8P41279 467 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 OR1G1P47890 313 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 HTR5AP47898 357 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 CCR8P51685 355 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 CCR9P51686 369 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 HMGCS2P54868 508 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 ZNF280AP59817 542 aaPredicted RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 PIN1Q13526 163 aaPredicted RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 YOD1Q5VVQ6 348 aaPredicted RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 C16orf54Q6UWD8 224 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 TPGS1Q6ZTW0 290 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 NLGN2Q8NFZ4 835 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 TOX2Q96NM4 488 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 NECAB3Q96P71 396 aaPredicted RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 COLEC11Q9BWP8 271 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 PARD6GQ9BYG4 376 aaPredicted RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 PIGMQ9H3S5 423 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 HRASLSQ9HDD0 168 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 SF3B6Q9Y3B4 125 aaKnown RBP10.88□□□□□ -0.67
PBX1-211ENST00000498497 SCN1AP35498 2009 aa10.88□□□□□ -0.67
PBX1-211ENST00000498497 A0A0B4J2A0 478 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 FAM221BA6H8Z2 402 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 SLC7A4O43246 635 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 MMP7P09237 267 aaPredicted RBP10.87□□□□□ -0.67
PBX1-211ENST00000498497 MAGEB1P43366 347 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 PSAPL1Q6NUJ1 521 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 BAIAP2L2Q6UXY1 529 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 BBS1Q8NFJ9 593 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 MED8Q96G25 268 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 MGME1Q9BQP7 344 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 SLC25A19Q9HC21 320 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 SHPKQ9UHJ6 478 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 SIRT4Q9Y6E7 314 aaPredicted RBP10.87□□□□□ -0.67
PBX1-211ENST00000498497 DOCK5Q9H7D0 1870 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 CPED1A4D0V7 1026 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 MARCH11A6NNE9 402 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 ABOP16442 354 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 TAP2Q03519 686 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 TNFRSF9Q07011 255 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 RPL13AP3Q6NVV1 102 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 SMARCD3Q6STE5 483 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 METAP1DQ6UB28 335 aaPredicted RBP10.87□□□□□ -0.67
PBX1-211ENST00000498497 PRR18Q8N4B5 295 aa10.87□□□□□ -0.67
PBX1-211ENST00000498497 OR5D16Q8NGK9 328 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms