RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 EPHA10Q5JZY3 1008 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CLLU1Q5K131 121 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DCAF10Q5QP82 559 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SYT6Q5T7P8 510 aaPredicted RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 LIPMQ5VYY2 423 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM220Q6QAJ8 160 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ARCQ7LC44 396 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 GRINAQ7Z429 371 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ERASQ7Z444 233 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PIM3Q86V86 326 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NAXDQ8IW45 347 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 C16orf71Q8IYS4 520 aaPredicted RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 MMGT1Q8N4V1 131 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 EIF4E3Q8N5X7 224 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 C8orf58Q8NAV2 365 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SDR42E1Q8WUS8 393 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RNF133Q8WVZ7 376 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DEDD2Q8WXF8 326 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB40AQ8WXH6 277 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM234Q8WY98 164 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 TM9SF4Q92544 642 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PPWD1Q96BP3 646 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ASB9Q96DX5 294 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB3CQ96E17 227 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PPP1R16AQ96I34 528 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 AKR1E2Q96JD6 320 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 COL21A1Q96P44 957 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CNN2Q99439 309 aaKnown RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NPY6RQ99463 290 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PHB2Q99623 299 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RBBP8Q99708 897 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 DCUN1D5Q9BTE7 237 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 CHRDL1Q9BU40 450 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 KATNB1Q9BVA0 655 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SDCBP2Q9H190 292 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 NIPAL2Q9H841 368 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ACTR8Q9H981 624 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SLAMF7Q9NQ25 335 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PLSCR3Q9NRY6 295 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 C14orf105Q9NVL8 296 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 C1orf109Q9NX04 203 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 PTTG3PQ9NZH4 202 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC25A10Q9UBX3 287 aaPredicted RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC23A1Q9UHI7 598 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ZDHHC2Q9UIJ5 367 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SCP2D1Q9UJQ7 156 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 GNG8Q9UK08 70 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF223Q9UK11 482 aaPredicted RBP2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB26Q9ULW5 256 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 FLVCR2Q9UPI3 526 aa2.88□□□□□ -1.95
SNRNP48-202ENST00000496946 SPATA31A5Q5VU36 1347 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SPATA31A7Q8IWB4 1347 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 NAIPQ13075 1403 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SPHKAPQ2M3C7 1700 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 FAM240BA0A1B0GVZ2 78 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 A0A1W2PR48 441 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SAGE2PA6NJ88 616 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 I6L893 689 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 J3KTA2 159 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CXCR6O00574 342 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 GRM6O15303 877 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 DUX1O43812 170 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 KIAA0513O60268 411 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RAD1O60671 282 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 GGCTO75223 188 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 NCR1O76036 304 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SEC14L2O76054 403 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 GADD45GO95257 159 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 VAPBO95292 243 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TTC4O95801 387 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TSPAN12O95859 305 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 IGF2P01344 180 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 C1QBP02746 253 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RLN1P04808 185 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 GYPCP04921 128 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RPLP0P05388 317 aaKnown RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CD5P06127 495 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ANXA3P12429 323 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SERPINA2P20848 420 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MATN1P21941 496 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MGAT1P26572 445 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CD6P30203 668 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SPRP35270 261 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CD200P41217 278 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 VIPR2P41587 438 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 MATKP42679 507 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CYB561P49447 251 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB9AP51151 201 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 BLKP51451 505 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CRYBA4P53673 196 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PNLIPRP2P54317 469 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SESN2P58004 480 aaPredicted RBP2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TIRAPP58753 221 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 CCL7P80098 99 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC10A7Q0GE19 358 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 TNK1Q13470 666 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 RAB32Q13637 225 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 DPYSL3Q14195 570 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 PGM5Q15124 567 aa2.87□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF239Q16600 458 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms