RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 FASNP49327 2511 aaKnown RBP6.41□□□□□ -1.38
USP39-219ENST00000496047 CPAMD8Q8IZJ3 1885 aa6.41□□□□□ -1.38
USP39-219ENST00000496047 SEC16AO15027 2179 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 CABIN1Q9Y6J0 2220 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 PNMA8CA0A1B0GUJ8 204 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 TRIM64BA6NI03 449 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 OR6C76A6NM76 312 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 RIIAD1A6NNX1 92 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 K7ESF4 209 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 GTPBP1O00178 669 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 FRS3O43559 492 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 TLX2O43763 284 aaPredicted RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 FCMRO60667 390 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ENTPD6O75354 484 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 BCAS1O75363 584 aaPredicted RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 CDC123O75794 336 aaPredicted RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 EPPINO95925 133 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 CSTAP01040 98 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 LCKP06239 509 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 DCNP07585 359 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 CT62P0C5K7 136 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 TSPAN19P0C672 248 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ZNF182P17025 639 aaPredicted RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 ZNF3P17036 446 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 DRD5P21918 477 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 PSMA1P25786 263 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 EPHA8P29322 1005 aaPredicted RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 SLC6A6P31641 620 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 HOXD12P35452 270 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ATP6V1E1P36543 226 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 MAP3K8P41279 467 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 GPR4P46093 362 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 OMPP47874 163 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 SLC6A8P48029 635 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 GABRA4P48169 554 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 SLC9A3P48764 834 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 CDH11P55287 796 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 OR1D5P58170 312 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 MAT1AQ00266 395 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 PRKCDQ05655 676 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 FUT7Q11130 342 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 TMED1Q13445 227 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ELAVL1Q15717 326 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 ZNF141Q15928 474 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 CLPPQ16740 277 aaPredicted RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 SYT16Q17RD7 645 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ZNF829Q3KNS6 432 aaPredicted RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 ARMCX4Q5H9R4 360 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 C3orf38Q5JPI3 329 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 PDZK1Q5T2W1 519 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 LCN1P1Q5VSP4 162 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 PMS2CLQ68D20 193 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ARHGAP11AQ6P4F7 1023 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ULK3Q6PHR2 472 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ZNF620Q6ZNG0 422 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 MED25Q71SY5 747 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 OLIG3Q7RTU3 272 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 SLC46A3Q7Z3Q1 461 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 HMGN2P46Q86SG4 172 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 TMEM151BQ8IW70 566 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 SFTPA2Q8IWL1 248 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 NRMQ8IXM6 262 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 SLC35F3Q8IY50 421 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 CLIP4Q8N3C7 705 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ARHGEF39Q8N4T4 335 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 PSD4Q8NDX1 1056 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 TMEM52Q8NDY8 209 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 PROKR2Q8NFJ6 384 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 CEP76Q8TAP6 659 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 BRIX1Q8TDN6 353 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 TMEM255BQ8WV15 326 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 DNAJA4Q8WW22 397 aaPredicted RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 CCDC74AQ96AQ1 378 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 LRR1Q96L50 414 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 VSTM2LQ96N03 204 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 NAA50Q9GZZ1 169 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 ZNF768Q9H5H4 540 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 SYNDIG1Q9H7V2 258 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 LIN28AQ9H9Z2 209 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 HHATLQ9HCP6 504 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 ENAMQ9NRM1 1142 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 PNO1Q9NRX1 252 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 CNIH4Q9P003 139 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 CCDC59Q9P031 241 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 SSR3Q9UNL2 185 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 DIMT1Q9UNQ2 313 aaKnown RBP6.4□□□□□ -1.38
USP39-219ENST00000496047 SLCO1B1Q9Y6L6 691 aa6.4□□□□□ -1.38
USP39-219ENST00000496047 GPR179Q6PRD1 2367 aa6.4□□□□□ -1.39
USP39-219ENST00000496047 KIAA1549Q9HCM3 1950 aa6.4□□□□□ -1.39
USP39-219ENST00000496047 C5orf42Q9H799 3197 aa6.4□□□□□ -1.39
USP39-219ENST00000496047 NPIPA5A0A0B4J1W7 369 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 MED19A0JLT2 244 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 GXYLT2A0PJZ3 443 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 FRG2CA6NGY1 282 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 KDM4EB2RXH2 506 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 CLDN25C9JDP6 229 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 PRR23D1E9PI22 279 aaPredicted RBP6.39□□□□□ -1.39
USP39-219ENST00000496047 NPIPA7E9PJI5 369 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 M0R129 80 aa6.39□□□□□ -1.39
USP39-219ENST00000496047 PEX12O00623 359 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms