RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 ZNF17P17021 662 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 LCN1P31025 176 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 P2RX1P51575 399 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 PPP2R2AP63151 447 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 ADAM8P78325 824 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 PHC1P78364 1004 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 FOXF1Q12946 379 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 FOXD4Q12950 439 aaPredicted RBP8.59□□□□□ -1.03
MSH5-218ENST00000494646 STX3Q13277 289 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 CTU2Q2VPK5 515 aaKnown RBP8.59□□□□□ -1.03
MSH5-218ENST00000494646 DEFB113Q30KQ7 82 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 TMEM176BQ3YBM2 270 aaPredicted RBP8.59□□□□□ -1.03
MSH5-218ENST00000494646 ALKBH2Q6NS38 261 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 MTERF4Q7Z6M4 381 aaKnown RBP8.59□□□□□ -1.03
MSH5-218ENST00000494646 ANKRD42Q8N9B4 389 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 ZNF527Q8NB42 609 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 CHDHQ8NE62 594 aaPredicted RBP8.59□□□□□ -1.03
MSH5-218ENST00000494646 OR4A15Q8NGL6 344 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 SFXN5Q8TD22 340 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 GPR119Q8TDV5 335 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 ZNF524Q96C55 264 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 SDF2Q99470 211 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 SORT1Q99523 831 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 NUF2Q9BZD4 464 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 SERHL2Q9H4I8 314 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 PLSCR4Q9NRQ2 329 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 NOP53Q9NZM5 478 aaKnown RBP8.59□□□□□ -1.03
MSH5-218ENST00000494646 MKLN1Q9UL63 735 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 MCTS1Q9ULC4 181 aaKnown RBP8.59□□□□□ -1.03
MSH5-218ENST00000494646 PCDHGB4Q9UN71 923 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 EMC9Q9Y3B6 208 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 TESMINQ9Y4I5 508 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 DTNAQ9Y4J8 743 aa8.59□□□□□ -1.03
MSH5-218ENST00000494646 RNF103-CHMP3A0A140T963 221 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 DEFB108AA8MXU0 73 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 C9JVG2 144 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 C3orf80F5H4A9 247 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 H3BNH8 94 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 ADAMDEC1O15204 470 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 TM9SF1O15321 606 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 ZNF500O60304 480 aaPredicted RBP8.58□□□□□ -1.04
MSH5-218ENST00000494646 C1QCP02747 245 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 KRT16P08779 473 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 DHRS4L1P0CG22 281 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 OR12D1P0DN82 309 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 CD53P19397 219 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 ME2P23368 584 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 CCR4P51679 360 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 RIPPLY3P57055 190 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 OCRLQ01968 901 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 GUSBP1Q15486 140 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 SMU1Q2TAY7 513 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 PDSS1Q5T2R2 415 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 PDZK1Q5T2W1 519 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 HHATQ5VTY9 493 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 ESPNLQ6ZVH7 1005 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 CAMKMTQ7Z624 323 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 HMGN2P46Q86SG4 172 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 TMCO5AQ8N6Q1 288 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 MGARPQ8TDB4 240 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 XAGE5Q8WWM1 108 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 RAB8BQ92930 207 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 ZNF775Q96BV0 537 aaPredicted RBP8.58□□□□□ -1.04
MSH5-218ENST00000494646 MOAP1Q96BY2 351 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 MBD6Q96DN6 1003 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 GMPPAQ96IJ6 420 aaPredicted RBP8.58□□□□□ -1.04
MSH5-218ENST00000494646 SLC35G5Q96KT7 338 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 KLHL15Q96M94 604 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 SRXN1Q9BYN0 137 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 OR51I1Q9H343 314 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 GSX1Q9H4S2 264 aaPredicted RBP8.58□□□□□ -1.04
MSH5-218ENST00000494646 UBTD1Q9HAC8 227 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 HHATLQ9HCP6 504 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 NEUROD4Q9HD90 331 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 SSU72Q9NP77 194 aaKnown RBP8.58□□□□□ -1.04
MSH5-218ENST00000494646 PAQR5Q9NXK6 330 aaPredicted RBP8.58□□□□□ -1.04
MSH5-218ENST00000494646 ZNF226Q9NYT6 803 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 KCNE5Q9UJ90 142 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 RAB21Q9UL25 225 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 ICAM5Q9UMF0 924 aa8.58□□□□□ -1.04
MSH5-218ENST00000494646 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.58□□□□□ -1.04
MSH5-218ENST00000494646 IGHV3-15A0A0B4J1V0 119 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 PRSS51A0A1B0GVH4 220 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 A0A1W2PNR3 127 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 C7orf72A4D263 438 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 SERINC4A6NH21 518 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 DUXAA6NLW8 204 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 NPIPB9F8W1W9 429 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 RNASET2O00584 256 aaKnown RBP8.57□□□□□ -1.04
MSH5-218ENST00000494646 ZNF264O43296 627 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 SCN2BO60939 215 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 SS18L1O75177 396 aaPredicted RBP8.57□□□□□ -1.04
MSH5-218ENST00000494646 SOX30O94993 753 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 THBDP07204 575 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 TUBBP07437 444 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 KITP10721 976 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 FCGR2AP12318 317 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 LBPP18428 481 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 UQCRC2P22695 453 aa8.57□□□□□ -1.04
MSH5-218ENST00000494646 CRYGSP22914 178 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms