RNA–Protein interactions for RNA: ENST00000494532.1

UBE3C-207, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-207ENST00000494532 NEURL1O76050 574 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 NUDT14O95848 222 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 LINGO3P0C6S8 592 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 HTR2AP28223 471 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 RRM2P31350 389 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 IFNA8P32881 189 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 MASP1P48740 699 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 P2RX1P51575 399 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 CDH12P55289 794 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 SUMO3P55854 103 aaPredicted RBP12.86□□□□□ -0.35
UBE3C-207ENST00000494532 SLC34A1Q06495 639 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 CBFBQ13951 182 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 GANABQ14697 944 aaKnown RBP12.86□□□□□ -0.35
UBE3C-207ENST00000494532 COL28A1Q2UY09 1125 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 SPINK14Q6IE38 97 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 BORAQ6PGQ7 559 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 ZNF227Q86WZ6 799 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 CADM2Q8N3J6 435 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 TOR1AIP2Q8NFQ8 470 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 OR5W2Q8NH69 310 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 PHF10Q8WUB8 498 aaKnown RBP12.86□□□□□ -0.35
UBE3C-207ENST00000494532 TRIM2Q9C040 744 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 POLR2J2Q9GZM3 115 aaKnown RBP12.86□□□□□ -0.35
UBE3C-207ENST00000494532 POLR2J3Q9H1A7 115 aaKnown RBP12.86□□□□□ -0.35
UBE3C-207ENST00000494532 TMEM27Q9HBJ8 222 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 ACAD8Q9UKU7 415 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 A4GNTQ9UNA3 340 aa12.86□□□□□ -0.35
UBE3C-207ENST00000494532 SAMHD1Q9Y3Z3 626 aaKnown RBP12.86□□□□□ -0.35
UBE3C-207ENST00000494532 URB1O60287 2271 aaKnown RBP12.86□□□□□ -0.35
UBE3C-207ENST00000494532 HEATR5AQ86XA9 2040 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 A0A087WV48 116 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 IGLV3-32A0A0A0MS00 114 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 TMEM8BA6NDV4 472 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 ANKUB1A6NFN9 424 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 TAF4O00268 1085 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 FFAR1O14842 300 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 DPM1O60762 260 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 SEMA7AO75326 666 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 SNX4O95219 450 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 OR5F1O95221 314 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 H1F0P07305 194 aaKnown RBP12.85□□□□□ -0.35
UBE3C-207ENST00000494532 PGCP20142 388 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 MSX1P28360 303 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 SMIM11AP58511 58 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 COPZ1P61923 177 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 FOXD4Q12950 439 aaPredicted RBP12.85□□□□□ -0.35
UBE3C-207ENST00000494532 PIN1Q13526 163 aaPredicted RBP12.85□□□□□ -0.35
UBE3C-207ENST00000494532 OR1Q1Q15612 314 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 SNCBQ16143 134 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 ZNF605Q86T29 641 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 PACS2Q86VP3 889 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 TSPYL5Q86VY4 417 aaPredicted RBP12.85□□□□□ -0.35
UBE3C-207ENST00000494532 OFCC1Q8IZS5 231 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 ICA1LQ8NDH6 482 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 MDS2Q8NDY4 140 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 PIK3C3Q8NEB9 887 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 OR4K17Q8NGC6 315 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 ADAMTS16Q8TE57 1224 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 HAS2Q92819 552 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 TMEM41AQ96HV5 264 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 JSRP1Q96MG2 331 aaPredicted RBP12.85□□□□□ -0.35
UBE3C-207ENST00000494532 C5orf34Q96MH7 638 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 SMAD5Q99717 465 aaKnown RBP12.85□□□□□ -0.35
UBE3C-207ENST00000494532 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.85□□□□□ -0.355e-25■■■■□ 24.9
UBE3C-207ENST00000494532 DSN1Q9H410 356 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 PROK2Q9HC23 129 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 VNN3Q9NY84 501 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 MED11Q9P086 117 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 RPS6KB2Q9UBS0 482 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 ICAM5Q9UMF0 924 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 HRH3Q9Y5N1 445 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 ACACAQ13085 2346 aa12.85□□□□□ -0.35
UBE3C-207ENST00000494532 A0A0G2JMM0 328 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 A0A1B0GWA3 101 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 A0A1W2PPB8 328 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 A0A1W2PRS3 328 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 TRAPPC13A5PLN9 417 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 SAC3D1A6NKF1 404 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 KIR3DP1A8MWS1 328 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 FAM47E-STBD1D6RA91 191 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 TNFRSF11BO00300 401 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 FAAHO00519 579 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 GNB5O14775 395 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 SNPHO15079 494 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 CDC40O60508 579 aaKnown RBP eCLIP12.84□□□□□ -0.35
UBE3C-207ENST00000494532 PRSS23O95084 383 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 GADD45GO95257 159 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 CD46P15529 392 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 ZNF23P17027 643 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 CNR1P21554 472 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 IDH2P48735 452 aaKnown RBP12.84□□□□□ -0.35
UBE3C-207ENST00000494532 DNASE1L1P49184 302 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 CXADRP78310 365 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 ST3GAL3Q11203 375 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 TRIP10Q15642 601 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 FGD3Q5JSP0 725 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 COLEC12Q5KU26 742 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 WBP2NLQ6ICG8 309 aa12.84□□□□□ -0.35
UBE3C-207ENST00000494532 ZNF613Q6PF04 617 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms