RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 UBTFL6P0CB48 400 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-224ENST00000494132 CD1EP15812 388 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF17P17021 662 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 SFTPDP35247 375 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 OPRM1P35372 400 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 RPS3AP61247 264 aaKnown RBP13.22□□□□□ -0.29
ATG4B-224ENST00000494132 CHRNEQ04844 493 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 SYPL1Q16563 259 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 CTU2Q2VPK5 515 aaKnown RBP13.22□□□□□ -0.29
ATG4B-224ENST00000494132 C6orf10Q5SRN2 563 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 ZZZ3Q8IYH5 903 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 TRIML2Q8N7C3 387 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 CNEP1R1Q8N9A8 125 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 ATP6V1C2Q8NEY4 427 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 FBXO27Q8NI29 283 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 CKAP2Q8WWK9 683 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 ZG16BQ96DA0 208 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 UCN2Q96RP3 112 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 NMUR2Q9GZQ4 415 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 L3MBTL1Q9Y468 752 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 AP4B1Q9Y6B7 739 aa13.22□□□□□ -0.29
ATG4B-224ENST00000494132 APCP25054 2843 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 CSMD1Q96PZ7 3565 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 A0A1W2PNV4 684 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 LINC01387J3KSC0 135 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 EFNA2O43921 213 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 CXCL13O43927 109 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 TNFSF13O75888 250 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 AQP8O94778 261 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 SOX30O94993 753 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 CSTAP01040 98 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 PRKCAP17252 672 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 SLC6A8P48029 635 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 CPA2P48052 419 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 EEFSECP57772 596 aaKnown RBP13.21□□□□□ -0.29
ATG4B-224ENST00000494132 STX1BP61266 288 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 HPCAP84074 193 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF141Q15928 474 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 SLC2A7Q6PXP3 512 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF619Q8N2I2 560 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 METTL25Q8N6Q8 603 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 OR10D3Q8NH80 312 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 GPR119Q8TDV5 335 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 ZFP90Q8TF47 636 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
ATG4B-224ENST00000494132 LURAP1Q96LR2 239 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 MAGEB18Q96M61 343 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF559Q9BR84 538 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 THUMPD3Q9BV44 507 aaKnown RBP13.21□□□□□ -0.29
ATG4B-224ENST00000494132 SFXN3Q9BWM7 321 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 ZNF446Q9NWS9 450 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 CLEC4AQ9UMR7 237 aa13.21□□□□□ -0.29
ATG4B-224ENST00000494132 POLQO75417 2590 aa13.21□□□□□ -0.3
ATG4B-224ENST00000494132 ANKHD1Q8IWZ3 2542 aaKnown RBP13.2□□□□□ -0.3
ATG4B-224ENST00000494132 DCHS2Q6V1P9 2916 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 A0A0J9YW62 118 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 FAM234BA2RU67 622 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 SYT5O00445 386 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 NR5A2O00482 541 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 SMNDC1O75940 238 aaKnown RBP eCLIP13.2□□□□□ -0.3
ATG4B-224ENST00000494132 AGR2O95994 175 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 IL18BPO95998 194 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 CHRM4P08173 479 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 ETFAP13804 333 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 SSTR2P30874 369 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 CPOXP36551 454 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 RAC1P63000 192 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 SKP2Q13309 424 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 FGFBP1Q14512 234 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 QPRTQ15274 297 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 FUNDC1Q8IVP5 155 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 LILRA2Q8N149 483 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 TOR1AIP2Q8NFQ8 470 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 LINC01560Q8TB33 94 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 C14orf79Q96F83 325 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 ADGRG7Q96K78 797 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 ZFP3Q96NJ6 502 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 PRRG4Q9BZD6 226 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 RMND5AQ9H871 391 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 HHATLQ9HCP6 504 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 CRIM1Q9NZV1 1036 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 JKAMPQ9P055 326 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 CCDC167Q9P0B6 97 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 DCTN4Q9UJW0 460 aa13.2□□□□□ -0.3
ATG4B-224ENST00000494132 ABCA4P78363 2273 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 CSMD2Q7Z408 3487 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 C7orf72A4D263 438 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 EIF4E2O60573 245 aaKnown RBP13.19□□□□□ -0.3
ATG4B-224ENST00000494132 TGDSO95455 350 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 KRT75O95678 551 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 NR2F1P10589 423 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 ME2P23368 584 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 RYKP34925 604 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 PGM1P36871 562 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 CRATP43155 626 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 KIR2DL3P43628 341 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 MVDP53602 400 aa13.19□□□□□ -0.3
ATG4B-224ENST00000494132 SUMO3P55854 103 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-224ENST00000494132 PLAURQ03405 335 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms