RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 TRAF3IP2O43734 574 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-216ENST00000493758 DUX1O43812 170 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 CYLC1P35663 651 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-216ENST00000493758 KRTAP10-1P60331 282 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 ADPRMQ3LIE5 342 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 RBM43Q6ZSC3 357 aaKnown RBP2.59□□□□□ -1.99
ITGB1-216ENST00000493758 LANCL3Q6ZV70 420 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 SYVN1Q86TM6 617 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 NANPQ8TBE9 248 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 DCUN1D4Q92564 292 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 IL22RA2Q969J5 263 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 MRPL38Q96DV4 380 aaKnown RBP2.59□□□□□ -1.99
ITGB1-216ENST00000493758 CELF6Q96J87 481 aaKnown RBP2.59□□□□□ -1.99
ITGB1-216ENST00000493758 MBOAT4Q96T53 435 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 NXF3Q9H4D5 531 aaKnown RBP2.59□□□□□ -1.99
ITGB1-216ENST00000493758 PAK1IP1Q9NWT1 392 aaPredicted RBP2.59□□□□□ -1.99
ITGB1-216ENST00000493758 UBQLN1Q9UMX0 589 aaKnown RBP2.59□□□□□ -1.99
ITGB1-216ENST00000493758 B9D1Q9UPM9 204 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 NUDCQ9Y266 331 aa2.59□□□□□ -1.99
ITGB1-216ENST00000493758 IGLV3-16A0A075B6K0 115 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 RNF103-CHMP3A0A140T963 221 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 OR6C65A6NJZ3 312 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 ANKRD30BLA7E2S9 258 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 ZNF264O43296 627 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 ECI2O75521 394 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 WISP3O95389 354 aaPredicted RBP2.58□□□□□ -2
ITGB1-216ENST00000493758 LALBAP00709 142 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 TGFAP01135 160 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 MT-ND3P03897 115 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 IGHV4-34P06331 123 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 ETS1P14921 441 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 DNAJB1P25685 340 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 RBMXP38159 391 aaKnown RBP2.58□□□□□ -2
ITGB1-216ENST00000493758 PPOXP50336 477 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 RGS1Q08116 209 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 RAB40BQ12829 278 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 SYT10Q6XYQ8 523 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 RNF165Q6ZSG1 346 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 TMEM252Q8N6L7 170 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 M1APQ8TC57 530 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 FCGR1BQ92637 280 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 KCNK16Q96T55 309 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 ACTR8Q9H981 624 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 SOHLH2Q9NX45 425 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 MOSPD1Q9UJG1 213 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 PRG3Q9Y2Y8 225 aaPredicted RBP2.58□□□□□ -2
ITGB1-216ENST00000493758 ABCC4O15439 1325 aa2.58□□□□□ -2
ITGB1-216ENST00000493758 TRIM64A6NGJ6 449 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 TRIM64BA6NI03 449 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 RASGRF2O14827 1237 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 SNAPINO95295 136 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 HPDP32754 393 aaPredicted RBP2.57□□□□□ -2
ITGB1-216ENST00000493758 HNRNPA3P51991 378 aaKnown RBP2.57□□□□□ -2
ITGB1-216ENST00000493758 PLK1P53350 603 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 APOC4P55056 127 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 CSTF1Q05048 431 aaKnown RBP2.57□□□□□ -2
ITGB1-216ENST00000493758 CHRNB3Q05901 458 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 LRRC63Q05C16 580 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 ZNF311Q5JNZ3 666 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 NIPAL3Q6P499 406 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 LRRC8BQ6P9F7 803 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 FAM199XQ6PEV8 388 aaPredicted RBP2.57□□□□□ -2
ITGB1-216ENST00000493758 FAM220AQ7Z4H9 259 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 LHFPL4Q7Z7J7 247 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 H1FOOQ8IZA3 346 aaPredicted RBP2.57□□□□□ -2
ITGB1-216ENST00000493758 LINC01561Q8N1V8 128 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 OR52I1Q8NGK6 324 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 VPS35Q96QK1 796 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 OR5B2Q96R09 309 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 RAB17Q9H0T7 212 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 MAGT1Q9H0U3 335 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 RDH8Q9NYR8 311 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 ATXN10Q9UBB4 475 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 BTNL2Q9UIR0 455 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 PLLPQ9Y342 182 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 OARD1Q9Y530 152 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 WSB1Q9Y6I7 421 aa2.57□□□□□ -2
ITGB1-216ENST00000493758 LTBP1Q14766 1721 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 A0A0U1RQV5 110 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 KRTAP4-16G5E9R7 235 aaPredicted RBP2.56□□□□□ -2
ITGB1-216ENST00000493758 MAGEB4O15481 346 aaPredicted RBP2.56□□□□□ -2
ITGB1-216ENST00000493758 HCN1O60741 890 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 ZNF780AO75290 641 aaPredicted RBP2.56□□□□□ -2
ITGB1-216ENST00000493758 SEC22BO75396 215 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 ALOX5P09917 674 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 FUT1P19526 365 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 TBXA2RP21731 343 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 CCND2P30279 289 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 NUDT1P36639 197 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 NAPAP54920 295 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 HSF2Q03933 536 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 SLC10A7Q0GE19 358 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 SPP2Q13103 211 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 CHI3L2Q15782 390 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 KRTAP5-2Q701N4 177 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 ARCQ7LC44 396 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 TMEM17Q86X19 198 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 FAM71E2Q8N5Q1 922 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 NKAPP1Q8N9T2 125 aa2.56□□□□□ -2
ITGB1-216ENST00000493758 OR52B4Q8NGK2 314 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms