RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 SLC46A1Q96NT5 459 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 FUNDC2Q9BWH2 189 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 NDEL1Q9GZM8 345 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 SIAEQ9HAT2 523 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 FOLH1BQ9HBA9 442 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 PALMDQ9NP74 551 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 MKKSQ9NPJ1 570 aaPredicted RBP9.27□□□□□ -0.93
PRPF3-206ENST00000493553 MAN2C1Q9NTJ4 1040 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 ZNF226Q9NYT6 803 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 HCN3Q9P1Z3 774 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 SEC14L4Q9UDX3 406 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 SLC35A3Q9Y2D2 325 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 OR10H1Q9Y4A9 318 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 CDH10Q9Y6N8 788 aa9.27□□□□□ -0.93
PRPF3-206ENST00000493553 SPAG17Q6Q759 2223 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 CACNA1IQ9P0X4 2223 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 IGHV5-51A0A0C4DH38 117 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 A0A1B0GVT2 93 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 A0A1B0GX78 115 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 OR6C76A6NM76 312 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 FAM227AF5H4B4 570 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 LAMTOR5O43504 91 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 PPM1BO75688 479 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 KCNK2O95069 426 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 ATE1O95260 518 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 S1PR1P21453 382 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 BCKDHBP21953 392 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 FBLP22087 321 aaKnown RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 CSTF2P33240 577 aaKnown RBP eCLIP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 RORAP35398 523 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 GDNFP39905 211 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 DUSP3P51452 185 aaPredicted RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 COPZ1P61923 177 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 PPP1CAP62136 330 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 CDK5Q00535 292 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 RHAGQ02094 409 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 ID2Q02363 134 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 NFATC3Q12968 1075 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 GINS1Q14691 196 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 ELAVL1Q15717 326 aaKnown RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 MOGQ16653 247 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 DEFB110Q30KQ9 67 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 MRPL2Q5T653 305 aaKnown RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 MFSD4BQ5TF39 518 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 PMS2CLQ68D20 193 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 TMEM71Q6P5X7 295 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 DGLUCYQ7Z3D6 616 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 GDF7Q7Z4P5 450 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 KRTAP1-3Q8IUG1 177 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 LACC1Q8IV20 430 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 SLC35F3Q8IY50 421 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 CLIP4Q8N3C7 705 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 DEFB123Q8N688 67 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 DTWD2Q8NBA8 298 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 KBTBD8Q8NFY9 601 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 OR52L1Q8NGH7 329 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 OR14A16Q8NHC5 309 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 BRIX1Q8TDN6 353 aaKnown RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 DNAJA4Q8WW22 397 aaPredicted RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 GAB3Q8WWW8 586 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 EDAQ92838 391 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 DAZLQ92904 295 aaKnown RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 YIPF6Q96EC8 236 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 PEX11GQ96HA9 241 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 TMEM80Q96HE8 168 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 LRFN5Q96NI6 719 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 GUCD1Q96NT3 240 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 SH3GL3Q99963 347 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 ASPNQ9BXN1 380 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 ZNF768Q9H5H4 540 aaKnown RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 PLGRKTQ9HBL7 147 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 PRMT8Q9NR22 394 aaPredicted RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 STARD5Q9NSY2 213 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 MRPS18AQ9NVS2 196 aaKnown RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 C19orf73Q9NVV2 129 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 PAK1IP1Q9NWT1 392 aaPredicted RBP9.26□□□□□ -0.93
PRPF3-206ENST00000493553 IL20Q9NYY1 176 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 RPS6KB2Q9UBS0 482 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 MED31Q9Y3C7 131 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 SLCO1B1Q9Y6L6 691 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 A3GALT2U3KPV4 340 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 CCDC88CQ9P219 2028 aa9.26□□□□□ -0.93
PRPF3-206ENST00000493553 A0A1B0GTQ1 180 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 A0A1W2PS29 197 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 CPSF4LA6NMK7 179 aaKnown RBP9.25□□□□□ -0.93
PRPF3-206ENST00000493553 PRODHO43272 600 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 CHP2O43745 196 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 HCN1O60741 890 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 SEMA7AO75326 666 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 INMTO95050 263 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 FADS2O95864 444 aaKnown RBP9.25□□□□□ -0.93
PRPF3-206ENST00000493553 EPPINO95925 133 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 IGF2P01344 180 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 BMP7P18075 431 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 MYL12AP19105 171 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 EPHA8P29322 1005 aaPredicted RBP9.25□□□□□ -0.93
PRPF3-206ENST00000493553 UGT2B10P36537 528 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 PPICP45877 212 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 SLC15A1P46059 708 aa9.25□□□□□ -0.93
PRPF3-206ENST00000493553 DHPSP49366 369 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms