RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 SLC5A12Q1EHB4 618 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 TMEM52BQ4KMG9 183 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 FAM120AOSQ5T036 256 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 PYHIN1Q6K0P9 492 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 FAM71F2Q6NXP2 309 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 MOB3BQ86TA1 216 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 DHRSXQ8N5I4 330 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 ANKFN1Q8N957 763 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 OR52M1Q8NGK5 317 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 GTSF1Q8WW33 167 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 RPL3LQ92901 407 aaKnown RBP3.44□□□□□ -1.86
SMC4-218ENST00000486711 TUBGCP2Q9BSJ2 902 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 CAB39LQ9H9S4 337 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 FRMPD4Q14CM0 1322 aa3.44□□□□□ -1.86
SMC4-218ENST00000486711 ANKRD30BQ9BXX2 1392 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.43□□□□□ -1.86
SMC4-218ENST00000486711 SMIM28A0A1B0GU29 152 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.43□□□□□ -1.86
SMC4-218ENST00000486711 CLRN2A0PK11 232 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 MPHOSPH10O00566 681 aaKnown RBP3.43□□□□□ -1.86
SMC4-218ENST00000486711 OR7A17O14581 309 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 TSC22D2O75157 780 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 ADORA2BP29275 332 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 EPHX2P34913 555 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 UGT1A3P35503 534 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 RPL29P47914 159 aaKnown RBP3.43□□□□□ -1.86
SMC4-218ENST00000486711 ARFIP1P53367 373 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 MXD4Q14582 209 aaPredicted RBP3.43□□□□□ -1.86
SMC4-218ENST00000486711 C10orf120Q5SQS8 335 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 CGB2Q6NT52 195 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 CASC1Q6TDU7 716 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 APOBEC3FQ8IUX4 373 aaKnown RBP3.43□□□□□ -1.86
SMC4-218ENST00000486711 GPR65Q8IYL9 337 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 ZBED8Q8IZ13 594 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 LINC01561Q8N1V8 128 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 CD177Q8N6Q3 437 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 STEAP2Q8NFT2 490 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 OR2T3Q8NH03 318 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 FAM3CQ92520 227 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 SERAC1Q96JX3 654 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 PAXXQ9BUH6 204 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 NT5C3AQ9H0P0 336 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 GORASP2Q9H8Y8 452 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 PAK1IP1Q9NWT1 392 aaPredicted RBP3.43□□□□□ -1.86
SMC4-218ENST00000486711 SPRR3Q9UBC9 169 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 ZNF221Q9UK13 617 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 MAB21L2Q9Y586 359 aa3.43□□□□□ -1.86
SMC4-218ENST00000486711 IGLV8-61A0A075B6I0 122 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 FRG2CA6NGY1 282 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 TMEM110-MUSTN1A8MSY1 372 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 A8MU10 97 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 G3V4G9 280 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 BTN3A3O00478 584 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 SPAG6O75602 509 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 GPX5O75715 221 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 SCGNO76038 276 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 CA1P00915 261 aaPredicted RBP3.42□□□□□ -1.86
SMC4-218ENST00000486711 STSP08842 583 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 HSMCR30P0CW71 290 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 DNAH10OSP0CZ25 163 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 ZNF44P15621 663 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 GCFC2P16383 781 aaKnown RBP3.42□□□□□ -1.86
SMC4-218ENST00000486711 HNF1AP20823 631 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 YWHABP31946 246 aaKnown RBP3.42□□□□□ -1.86
SMC4-218ENST00000486711 P2RY4P51582 365 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 LIM2P55344 173 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 ACTR1AP61163 376 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 MRPS11P82912 194 aaKnown RBP3.42□□□□□ -1.86
SMC4-218ENST00000486711 SLC10A7Q0GE19 358 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 GPM6BQ13491 265 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 GANABQ14697 944 aaKnown RBP3.42□□□□□ -1.86
SMC4-218ENST00000486711 PDK3Q15120 406 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 GGTA1PQ4G0N0 100 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 SPATA46Q5T0L3 261 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 LIPNQ5VXI9 398 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 PMF1Q6P1K2 205 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 PAMR1Q6UXH9 720 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 TMEM110Q86TL2 294 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 TPRA1Q86W33 373 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 CCDC50Q8IVM0 306 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 SLC38A6Q8IZM9 456 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 ZNF525Q8N782 197 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 OR51G2Q8NGK0 314 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 MS4A14Q96JA4 679 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 AMDHD1Q96NU7 426 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 KIR2DL4Q99706 377 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 CCT7Q99832 543 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 CITED1Q99966 193 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 EDEM2Q9BV94 578 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 IKZF5Q9H5V7 419 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 ZNF385DQ9H6B1 395 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 SMPD3Q9NY59 655 aaPredicted RBP3.42□□□□□ -1.86
SMC4-218ENST00000486711 WRAP73Q9P2S5 460 aaPredicted RBP3.42□□□□□ -1.86
SMC4-218ENST00000486711 APOBEC3BQ9UH17 382 aaKnown RBP3.42□□□□□ -1.86
SMC4-218ENST00000486711 PCSK1NQ9UHG2 260 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 KLHL21Q9UJP4 597 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 PDE10AQ9Y233 779 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 GON4LQ3T8J9 2241 aa3.42□□□□□ -1.86
SMC4-218ENST00000486711 IGHV2-70DA0A0C4DH43 119 aa3.41□□□□□ -1.86
SMC4-218ENST00000486711 METTL21EPA6NDL7 271 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms