RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ANGPTL1O95841 491 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 TFP02787 698 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 RNASE1P07998 156 aaKnown RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 DDX5P17844 614 aaKnown RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 SERPINB4P48594 390 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 FOXG1P55316 489 aaPredicted RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 LMO4P61968 165 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 TPM4P67936 248 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 PSG6Q00889 435 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 POU4F1Q01851 419 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 RASGEF1BQ0VAM2 473 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 SPA17Q15506 151 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 TRIP13Q15645 432 aaPredicted RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 GABRA6Q16445 453 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 PDSS1Q5T2R2 415 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 KPRPQ5T749 579 aaPredicted RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 TEDDM1Q5T9Z0 273 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 CPTPQ5TA50 214 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 FAM180BQ6P0A1 224 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 LEG1Q6P5S2 330 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 DOK3Q7L591 496 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 LRRC70Q7Z2Q7 622 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 SPATA19Q7Z5L4 167 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 TRABD2AQ86V40 505 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 CARM1Q86X55 608 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 VSTM4Q8IW00 320 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 LILRA2Q8N149 483 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 SIGLECL1Q8N7X8 197 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 PDPRQ8NCN5 879 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 TOR1AIP2Q8NFQ8 470 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 ZNF675Q8TD23 568 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 CNRIP1Q96F85 164 aaPredicted RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 REXO5Q96IC2 774 aaKnown RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 MUS81Q96NY9 551 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 ZNF300Q96RE9 604 aaPredicted RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 CCT8L2Q96SF2 557 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 CITED1Q99966 193 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 RSPO3Q9BXY4 272 aaPredicted RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 CD244Q9BZW8 370 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 COQ10BQ9H8M1 238 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 ZMAT3Q9HA38 289 aaKnown RBP7.14□□□□□ -1.27
XRN1-212ENST00000486211 PLAC1Q9HBJ0 212 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 CA10Q9NS85 328 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 MED17Q9NVC6 651 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 ZDHHC2Q9UIJ5 367 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 PCDHA9Q9Y5H5 950 aa7.14□□□□□ -1.27
XRN1-212ENST00000486211 IGHV3-15A0A0B4J1V0 119 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 C9JVG2 144 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 EFNA2O43921 213 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 TTC4O95801 387 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 PRB2P02812 416 aaPredicted RBP7.13□□□□□ -1.27
XRN1-212ENST00000486211 TPM1P09493 284 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 OR4A8P0C604 315 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 PGAM1P18669 254 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 ME2P23368 584 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 SFTPDP35247 375 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 VPS41P49754 854 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 TAS2R39P59534 338 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 PRR5P85299 388 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 C17orf67Q0P5P2 114 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 OR4D1Q15615 310 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 ZNHIT3Q15649 155 aaPredicted RBP7.13□□□□□ -1.27
XRN1-212ENST00000486211 TCHHL1Q5QJ38 904 aaPredicted RBP7.13□□□□□ -1.27
XRN1-212ENST00000486211 FBXW9Q5XUX1 488 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 GSTA5Q7RTV2 222 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 CNGA4Q8IV77 575 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 CCDC170Q8IYT3 715 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 SLC43A2Q8N370 569 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.13□□□□□ -1.271e-11■■□□□ 14.1
XRN1-212ENST00000486211 NANPQ8TBE9 248 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 SLC9A6Q92581 669 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 ERP27Q96DN0 273 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 RBM4BQ9BQ04 359 aaKnown RBP7.13□□□□□ -1.27
XRN1-212ENST00000486211 DERL2Q9GZP9 239 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 NARFLQ9H6Q4 476 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 TIGARQ9NQ88 270 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 TREM2Q9NZC2 230 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 KLHL9Q9P2J3 617 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 OPN4Q9UHM6 478 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 MCM8Q9UJA3 840 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 FBXO9Q9UK97 447 aaPredicted RBP7.13□□□□□ -1.27
XRN1-212ENST00000486211 OR10H1Q9Y4A9 318 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 CORINQ9Y5Q5 1042 aa7.13□□□□□ -1.27
XRN1-212ENST00000486211 FAM95CA0A1B0GW59 222 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 CIB4A0PJX0 185 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 C1orf226A1L170 272 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 ZNF724A8MTY0 619 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 H0YIV9 168 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 SCAMP2O15127 329 aaKnown RBP7.12□□□□□ -1.27
XRN1-212ENST00000486211 BCAS2O75934 225 aaPredicted RBP7.12□□□□□ -1.27
XRN1-212ENST00000486211 SEMA3DO95025 777 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 IGHV3-9P01782 118 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 TPM3P06753 285 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 KLK1P06870 262 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 ITGA5P08648 1049 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 SAGP10523 405 aaPredicted RBP7.12□□□□□ -1.27
XRN1-212ENST00000486211 FPR2P25090 351 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 RAB10P61026 200 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 ZP4Q12836 540 aa7.12□□□□□ -1.27
XRN1-212ENST00000486211 TBX2Q13207 712 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms