RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	NECTIN1	Q15223	517 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	CD226	Q15762	336 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	ZKSCAN8	Q15776	578 aa	Predicted RBP	3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	USH1G	Q495M9	461 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	SEL1L3	Q68CR1	1132 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	REP15	Q6BDI9	236 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	NOTCH2NL	Q7Z3S9	236 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	ERAS	Q7Z444	233 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	PHC2	Q8IXK0	858 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	WDSUB1	Q8N9V3	476 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	RELL2	Q8NC24	303 aa	Predicted RBP	3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	STEAP2	Q8NFT2	490 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	OR52M1	Q8NGK5	317 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	OR2T34	Q8NGX1	318 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	SPRYD4	Q8WW59	207 aa	Predicted RBP	3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	TADA1	Q96BN2	335 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	BIRC7	Q96CA5	298 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	TTC25	Q96NG3	672 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	AGAP3	Q96P47	875 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	IWS1	Q96ST2	819 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	OMD	Q99983	421 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	TRIM9	Q9C026	710 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	PANK3	Q9H999	370 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	RNF14	Q9UBS8	474 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	CPQ	Q9Y646	472 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	CFAP46	Q8IYW2	2715 aa		3.2	□□□□□ -1.9
VPS8-223	ENST00000485024	DMXL1	Q9Y485	3027 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	IGLV4-3	A0A075B6K6	122 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024		A0A1W2PNV4	684 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	MFSD2B	A6NFX1	497 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	LRRC30	A6NM36	301 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024		H0YL77	283 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024		K7EQM0	130 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024		K7ERI5	159 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	XPO1	O14980	1071 aa	Known RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	RIPK2	O43353	540 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	ZNF749	O43361	778 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	RANBP6	O60518	1105 aa	Known RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	RAMP1	O60894	148 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	BCAS1	O75363	584 aa	Predicted RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	MTX2	O75431	263 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	SORBS2	O94875	1100 aa	Known RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	UGT2B4	P06133	528 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	HOXB7	P09629	217 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	CYP11B1	P15538	503 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	UCP1	P25874	307 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	DLST	P36957	453 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	SLC1A4	P43007	532 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	SSR1	P43307	286 aa	Known RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	STK19	P49842	368 aa	Predicted RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	CSRP3	P50461	194 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	RIPK1	Q13546	671 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	CNPY1	Q3B7I2	92 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	FILIP1L	Q4L180	1135 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	VWA2	Q5GFL6	755 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	ASPHD2	Q6ICH7	369 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	CENPP	Q6IPU0	288 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	PRR5L	Q6MZQ0	368 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	CES3	Q6UWW8	571 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	SYT10	Q6XYQ8	523 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	SPAG16	Q8N0X2	631 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	SYT14	Q8NB59	555 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	PNPT1	Q8TCS8	783 aa	Known RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	NABP1	Q96AH0	204 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	UPRT	Q96BW1	309 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	LINC00479	Q96M42	142 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	ZNF607	Q96SK3	696 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	SLC39A3	Q9BRY0	314 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	TBC1D10A	Q9BXI6	508 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	COMMD4	Q9H0A8	199 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	RNF41	Q9H4P4	317 aa	Predicted RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	DHX33	Q9H6R0	707 aa	Known RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	SCRT2	Q9NQ03	307 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	RBM28	Q9NW13	759 aa	Known RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	TAS2R16	Q9NYV7	291 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	NUDT4	Q9NZJ9	180 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	TMEM181	Q9P2C4	612 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	CRLS1	Q9UJA2	301 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	SPATA2	Q9UM82	520 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	MRPL11	Q9Y3B7	192 aa	Known RBP	3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	WDR45	Q9Y484	360 aa		3.19	□□□□□ -1.9
VPS8-223	ENST00000485024	FRY	Q5TBA9	3013 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	PCNX1	Q96RV3	2341 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024		A0A087X002	238 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	SDHD	O14521	159 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	IMPA2	O14732	288 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	TYROBP	O43914	113 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	UFL1	O94874	794 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	PRAMEF12	O95522	483 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	POP4	O95707	220 aa	Known RBP	3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	IGHD	P01880	384 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	ZSCAN5DP	P0CG00	497 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	LMO2	P25791	158 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	OXTR	P30559	389 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	CYLC1	P35663	651 aa	Predicted RBP	3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	RPL34	P49207	117 aa	Known RBP	3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	PPT1	P50897	306 aa		3.18	□□□□□ -1.9
VPS8-223	ENST00000485024	RAG2	P55895	527 aa		3.18	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms