RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 FOXF1Q12946 379 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 MAPK14Q16539 360 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 SGCBQ16585 318 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 TMEM44Q2T9K0 475 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 LRRC74BQ6ZQY2 392 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 LIX1LQ8IVB5 337 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 OR5W2Q8NH69 310 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 WNT2BQ93097 391 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 NPAS1Q99742 590 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 PINK1Q9BXM7 581 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 LAT2Q9GZY6 243 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 SAP130Q9H0E3 1048 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 QRSL1Q9H0R6 528 aaKnown RBP17.26■□□□□ 0.35
SNX17-206ENST00000484886 RUBCNLQ9H714 662 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 CLCF1Q9UBD9 225 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 SLC35A3Q9Y2D2 325 aa17.26■□□□□ 0.35
SNX17-206ENST00000484886 C7orf72A4D263 438 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 SLC22A20A6NK97 555 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 CYSRT1A8MQ03 144 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 CLIC1O00299 241 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 BCHEP06276 602 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 LINGO3P0C6S8 592 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 TMIGD3P0DMS9 266 aaPredicted RBP17.25■□□□□ 0.35
SNX17-206ENST00000484886 AGFG1P52594 562 aaKnown RBP17.25■□□□□ 0.35
SNX17-206ENST00000484886 ARFIP2P53365 341 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 CLDN15P56746 228 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 SKP2Q13309 424 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 FGFBP1Q14512 234 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 FBXO27Q8NI29 283 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 GPR119Q8TDV5 335 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 OIT3Q8WWZ8 545 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 INTS12Q96CB8 462 aaKnown RBP17.25■□□□□ 0.35
SNX17-206ENST00000484886 ARSGQ96EG1 525 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 THUMPD3Q9BV44 507 aaKnown RBP17.25■□□□□ 0.35
SNX17-206ENST00000484886 SLC38A1Q9H2H9 487 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 CACYBPQ9HB71 228 aaKnown RBP17.25■□□□□ 0.35
SNX17-206ENST00000484886 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.25■□□□□ 0.35
SNX17-206ENST00000484886 THUMPD1Q9NXG2 353 aaKnown RBP17.25■□□□□ 0.35
SNX17-206ENST00000484886 CALML5Q9NZT1 146 aa17.25■□□□□ 0.35
SNX17-206ENST00000484886 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.25■□□□□ 0.35
SNX17-206ENST00000484886 GPC6Q9Y625 555 aaPredicted RBP17.25■□□□□ 0.35
SNX17-206ENST00000484886 ANGPT2O15123 496 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 CTSSP25774 331 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 MDH1P40925 334 aaKnown RBP17.24■□□□□ 0.35
SNX17-206ENST00000484886 EIF1AXP47813 144 aaKnown RBP17.24■□□□□ 0.35
SNX17-206ENST00000484886 ZNF136P52737 540 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 MVDP53602 400 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 KCNJ10P78508 379 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 GNA13Q14344 377 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 QPRTQ15274 297 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 TOMM34Q15785 309 aaPredicted RBP17.24■□□□□ 0.35
SNX17-206ENST00000484886 PAGE3Q5JUK9 113 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 MEX3BQ6ZN04 569 aaKnown RBP17.24■□□□□ 0.35
SNX17-206ENST00000484886 ADGRE4PQ86SQ3 457 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 GCNT2Q8N0V5 402 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 ATP6V1C2Q8NEY4 427 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 POC1BQ8TC44 478 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 WDR60Q8WVS4 1066 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 ZG16BQ96DA0 208 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 MTHFD2LQ9H903 347 aaPredicted RBP17.24■□□□□ 0.35
SNX17-206ENST00000484886 DOCK7Q96N67 2140 aa17.24■□□□□ 0.35
SNX17-206ENST00000484886 A0A1W2PP18 115 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 EEF1E1-BLOC1S5C9J1V9 151 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 EEF1E1O43324 174 aaKnown RBP17.23■□□□□ 0.35
SNX17-206ENST00000484886 TGM6O95932 706 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 CD1EP15812 388 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 IL7RP16871 459 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 PGCP20142 388 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 PPIBP23284 216 aaKnown RBP17.23■□□□□ 0.35
SNX17-206ENST00000484886 RYKP34925 604 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 SFTPDP35247 375 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 OPRM1P35372 400 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 CRISP3P54108 245 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 RAC1P63000 192 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 FADDQ13158 208 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 PON3Q15166 354 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 RGNQ15493 299 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 LRIF1Q5T3J3 769 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 METTL21CQ5VZV1 264 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 PEX5LQ8IYB4 626 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 LILRA2Q8N149 483 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 ZNF563Q8TA94 476 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 LRRC46Q96FV0 321 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 ZNF845Q96IR2 970 aaPredicted RBP17.23■□□□□ 0.35
SNX17-206ENST00000484886 ZFP3Q96NJ6 502 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 UCN2Q96RP3 112 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 PRRG4Q9BZD6 226 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 ZNF385DQ9H6B1 395 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 CCDC134Q9H6E4 229 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 SLC25A37Q9NYZ2 338 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 SLAMF8Q9P0V8 285 aa17.23■□□□□ 0.35
SNX17-206ENST00000484886 ZNF629Q9UEG4 869 aaPredicted RBP17.23■□□□□ 0.35
SNX17-206ENST00000484886 LEF1Q9UJU2 399 aaPredicted RBP17.23■□□□□ 0.35
SNX17-206ENST00000484886 AGAP5A6NIR3 686 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 CLDN24A6NM45 220 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 C5orf58C9J3I9 102 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 TNFSF11O14788 317 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 RCBTB2O95199 551 aa17.22■□□□□ 0.35
SNX17-206ENST00000484886 DBIP07108 87 aaKnown RBP17.22■□□□□ 0.35
SNX17-206ENST00000484886 PRKCAP17252 672 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms