RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 LINGO3P0C6S8 592 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 PEPDP12955 493 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 IL7RP16871 459 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 ZNF708P17019 499 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 PTGER4P35408 488 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 PGM1P36871 562 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 ADH7P40394 386 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 SUCLG1P53597 346 aaKnown RBP17.04■□□□□ 0.32
AGRN-208ENST00000479707 TPD52P55327 224 aaPredicted RBP17.04■□□□□ 0.32
AGRN-208ENST00000479707 MTPNP58546 118 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 FOXF1Q12946 379 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 SKP2Q13309 424 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 MAPRE2Q15555 327 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 TMEM44Q2T9K0 475 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 GCNT6Q5T4J0 391 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 REP15Q6BDI9 236 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 MTDHQ86UE4 582 aaKnown RBP17.04■□□□□ 0.32
AGRN-208ENST00000479707 VRK2Q86Y07 508 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 CCDC71Q8IV32 467 aaPredicted RBP17.04■□□□□ 0.32
AGRN-208ENST00000479707 PEX5LQ8IYB4 626 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 POU5F2Q8N7G0 328 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 OR5W2Q8NH69 310 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 NFKBIDQ8NI38 313 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 WDR60Q8WVS4 1066 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 ZBTB8AQ96BR9 441 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 ZNF524Q96C55 264 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 ANKRD27Q96NW4 1050 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 TREX2Q9BQ50 279 aaPredicted RBP17.04■□□□□ 0.32
AGRN-208ENST00000479707 A4GALTQ9NPC4 353 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 COQ3Q9NZJ6 369 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 RNF6Q9Y252 685 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 SLC35A3Q9Y2D2 325 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 ICE1Q9Y2F5 2266 aa17.04■□□□□ 0.32
AGRN-208ENST00000479707 MRASO14807 208 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 SNX3O60493 162 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 CCDC22O60826 627 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 EPPINO95925 133 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 DBIP07108 87 aaKnown RBP17.03■□□□□ 0.32
AGRN-208ENST00000479707 BMP2P12643 396 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 GPX2P18283 190 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 RYKP34925 604 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 SUMO3P55854 103 aaPredicted RBP17.03■□□□□ 0.32
AGRN-208ENST00000479707 CLDN20P56880 219 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 CBFBQ13951 182 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 CYLC2Q14093 348 aaPredicted RBP17.03■□□□□ 0.32
AGRN-208ENST00000479707 GNA13Q14344 377 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 SF3B4Q15427 424 aaKnown RBP eCLIP17.03■□□□□ 0.322e-8■■■■□ 23.2
AGRN-208ENST00000479707 XKRXQ6PP77 449 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 SEM1Q6ZVN7 128 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 GTPBP8Q8N3Z3 284 aaPredicted RBP17.03■□□□□ 0.32
AGRN-208ENST00000479707 MEIOBQ8N635 442 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 OR52P1PQ8NH57 321 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 FBXO27Q8NI29 283 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 CNOT9Q92600 299 aaKnown RBP17.03■□□□□ 0.32
AGRN-208ENST00000479707 SLC39A3Q9BRY0 314 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 TMEM185BQ9H7F4 350 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 CORO2BQ9UQ03 480 aa17.03■□□□□ 0.32
AGRN-208ENST00000479707 A0A0G2JNJ9 132 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 A0A0G2JPF8 293 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 CLCA1A8K7I4 914 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 HNRNPCL2B2RXH8 293 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 HNRNPCL3B7ZW38 293 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 LINC01387J3KSC0 135 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 HNRNPCL1O60812 293 aaKnown RBP17.02■□□□□ 0.32
AGRN-208ENST00000479707 TOXO94900 526 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 HNRNPCL4P0DMR1 293 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 ARAFP10398 606 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 ZNF17P17021 662 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 IL11P20809 199 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 RPS4Y1P22090 263 aaKnown RBP17.02■□□□□ 0.32
AGRN-208ENST00000479707 ADSLP30566 484 aaPredicted RBP17.02■□□□□ 0.32
AGRN-208ENST00000479707 CLDN15P56746 228 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 QPRTQ15274 297 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 BCL2A1Q16548 175 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 HIST2H2BCQ6DN03 193 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 CHMP1BQ7LBR1 199 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 TNIP2Q8NFZ5 429 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 ZPLD1Q8TCW7 415 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 OIT3Q8WWZ8 545 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 PLEKHB1Q9UF11 243 aaPredicted RBP17.02■□□□□ 0.32
AGRN-208ENST00000479707 Q9UFV3 132 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 GMEB1Q9Y692 573 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 AP4B1Q9Y6B7 739 aa17.02■□□□□ 0.32
AGRN-208ENST00000479707 DSPPQ9NZW4 1301 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 LRRK2Q5S007 2527 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 BBIP1A8MTZ0 92 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 PGM3O95394 542 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 PRKCAP17252 672 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 PSMA4P25789 261 aaKnown RBP17.01■□□□□ 0.31
AGRN-208ENST00000479707 COL8A1P27658 744 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 CDK6Q00534 326 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 PLAURQ03405 335 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 TRMT5Q32P41 509 aaKnown RBP17.01■□□□□ 0.31
AGRN-208ENST00000479707 MRPL2Q5T653 305 aaKnown RBP17.01■□□□□ 0.31
AGRN-208ENST00000479707 NSUN5P2Q63ZY6 315 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 ZNF836Q6ZNA1 936 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 MAMDC2Q7Z304 686 aaPredicted RBP17.01■□□□□ 0.31
AGRN-208ENST00000479707 LACC1Q8IV20 430 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 ATP6V1C2Q8NEY4 427 aa17.01■□□□□ 0.31
AGRN-208ENST00000479707 ZNF563Q8TA94 476 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms