RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 GPX2P18283 190 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 PGCP20142 388 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 DRD4P21917 467 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 ME2P23368 584 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 SKP2Q13309 424 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 TMEM44Q2T9K0 475 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 TRMT5Q32P41 509 aaKnown RBP18.52■□□□□ 0.56
VARS-224ENST00000479051 NDUFAF6Q330K2 333 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 RTL6Q6ICC9 239 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 NCCRP1Q6ZVX7 275 aaPredicted RBP18.52■□□□□ 0.56
VARS-224ENST00000479051 SNX32Q86XE0 403 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 RPRMLQ8N4K4 120 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 MARVELD2Q8N4S9 558 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 BBS10Q8TAM1 723 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 SDCCAG3Q96C92 435 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 ZG16BQ96DA0 208 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 ARSGQ96EG1 525 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 ANKRD27Q96NW4 1050 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 PSMG3-AS1Q96PY0 264 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 TREX2Q9BQ50 279 aaPredicted RBP18.52■□□□□ 0.56
VARS-224ENST00000479051 THUMPD3Q9BV44 507 aaKnown RBP18.52■□□□□ 0.56
VARS-224ENST00000479051 QRSL1Q9H0R6 528 aaKnown RBP18.52■□□□□ 0.56
VARS-224ENST00000479051 ARMC7Q9H6L4 198 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 RUBCNLQ9H714 662 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 CALHM2Q9HA72 323 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 ZNF232Q9UNY5 417 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 ZNF337Q9Y3M9 751 aa18.52■□□□□ 0.56
VARS-224ENST00000479051 DOPEY2Q9Y3R5 2298 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 MRASO14807 208 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 SNX3O60493 162 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 NPPAP01160 153 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 NUDT7P0C024 238 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 LINGO3P0C6S8 592 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 ARAFP10398 606 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 NID1P14543 1247 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 RPS4Y1P22090 263 aaKnown RBP18.51■□□□□ 0.55
VARS-224ENST00000479051 ADH6P28332 368 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 PGM1P36871 562 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 CLDN18P56856 261 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 RPS3AP61247 264 aaKnown RBP18.51■□□□□ 0.55
VARS-224ENST00000479051 LARS2Q15031 903 aaKnown RBP18.51■□□□□ 0.55
VARS-224ENST00000479051 ZSWIM7Q19AV6 140 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 LIN52Q52LA3 116 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 RIPPLY2Q5TAB7 128 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 NSUN5P2Q63ZY6 315 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 UBQLNLQ8IYU4 475 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 FAM71CQ8NEG0 241 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 OR52P1PQ8NH57 321 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 GPR119Q8TDV5 335 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 TMEM234Q8WY98 164 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 SMPDL3BQ92485 455 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 TRIB1Q96RU8 372 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 SH3GL1Q99961 368 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 EXOSC3Q9NQT5 275 aaKnown RBP18.51■□□□□ 0.55
VARS-224ENST00000479051 GID8Q9NWU2 228 aa18.51■□□□□ 0.55
VARS-224ENST00000479051 PHF3Q92576 2039 aaKnown RBP18.5■□□□□ 0.55
VARS-224ENST00000479051 DSPPQ9NZW4 1301 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 DOPEY1Q5JWR5 2465 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 LOC100653049A0A140TA62 436 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 A1L4Q6 167 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 CD8B2A6NJW9 211 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 SHISA8B8ZZ34 492 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 FBP2O00757 339 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 SEC14L5O43304 696 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 KRT34O76011 436 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 UQCRBP14927 111 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 SLC6A2P23975 617 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 ELK4P28324 431 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 CHRNB4P30926 498 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 SLC6A8P48029 635 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 CDK6Q00534 326 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 FOXF1Q12946 379 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 ART3Q13508 389 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 QPRTQ15274 297 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 MAPK11Q15759 364 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 CYP51A1Q16850 503 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 REP15Q6BDI9 236 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 MAMDC2Q7Z304 686 aaPredicted RBP18.5■□□□□ 0.55
VARS-224ENST00000479051 HMGN2P46Q86SG4 172 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 KRT73Q86Y46 540 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 RP9Q8TA86 221 aaKnown RBP18.5■□□□□ 0.55
VARS-224ENST00000479051 CA5BP1Q8WTZ4 195 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 MAL2Q969L2 176 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 MRGPRX4Q96LA9 322 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 RNF145Q96MT1 663 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 TUBA1CQ9BQE3 449 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 TMEM38AQ9H6F2 299 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 BCL2L10Q9HD36 194 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 ARMCX1Q9P291 453 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 IFT52Q9Y366 437 aa18.5■□□□□ 0.55
VARS-224ENST00000479051 PCNX3Q9H6A9 2034 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 HSPB2A8KAH6 182 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 CLDN14O95500 239 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 IL2RAP01589 272 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 THBS1P07996 1170 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 TIMP3P35625 211 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 MTPNP58546 118 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 RAC1P63000 192 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 HSPB2Q16082 182 aa18.49■□□□□ 0.55
VARS-224ENST00000479051 RPS26P11Q5JNZ5 115 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms