RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 SLC22A3O75751 556 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 CSTAP01040 98 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 LINGO3P0C6S8 592 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 CD1EP15812 388 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 PGCP20142 388 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 FKBP2P26885 142 aaKnown RBP18.41■□□□□ 0.54
SNX13-206ENST00000474067 EPHA3P29320 983 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 KCNJ5P48544 419 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 PDCD4Q53EL6 469 aaKnown RBP18.41■□□□□ 0.54
SNX13-206ENST00000474067 SAXO2Q658L1 398 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 HEPHL1Q6MZM0 1159 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 MSANTD1Q6ZTZ1 278 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 GGNQ86UU5 652 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 OR6K3Q8NGY3 331 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 LRRC8CQ8TDW0 803 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 XAGE5Q8WWM1 108 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 FIG4Q92562 907 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 MAELQ96JY0 434 aaKnown RBP18.41■□□□□ 0.54
SNX13-206ENST00000474067 LAT2Q9GZY6 243 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 PRDM4Q9UKN5 801 aa18.41■□□□□ 0.54
SNX13-206ENST00000474067 SPIN1Q9Y657 262 aaPredicted RBP18.41■□□□□ 0.54
SNX13-206ENST00000474067 SH3D21A4FU49 640 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 UQCRBP14927 111 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 SLC7A1P30825 629 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 CD79BP40259 229 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 CCR4P51679 360 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 CARD18P57730 90 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 STX1BP61266 288 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 IRX1P78414 480 aaPredicted RBP18.4■□□□□ 0.54
SNX13-206ENST00000474067 RNPS1Q15287 305 aaKnown RBP18.4■□□□□ 0.54
SNX13-206ENST00000474067 PDZK1Q5T2W1 519 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 C3orf33Q6P1S2 294 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 DYDC1Q8WWB3 177 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 ST8SIA1Q92185 356 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 STARD4Q96DR4 205 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 GPATCH1Q9BRR8 931 aaKnown RBP18.4■□□□□ 0.54
SNX13-206ENST00000474067 CACYBPQ9HB71 228 aaKnown RBP18.4■□□□□ 0.54
SNX13-206ENST00000474067 GP6Q9HCN6 339 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 THUMPD1Q9NXG2 353 aaKnown RBP18.4■□□□□ 0.54
SNX13-206ENST00000474067 ZIM2Q9NZV7 527 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 GPR45Q9Y5Y3 372 aa18.4■□□□□ 0.54
SNX13-206ENST00000474067 MYO9AB2RTY4 2548 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 GOLGA8QA0A0J9YX86 632 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 FAM221AA4D161 298 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 GOLGA8OA6NCC3 632 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 TMEM247A6NEH6 219 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 GOLGA8NF8WBI6 632 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 RFXANKO14593 260 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 ZNF195O14628 629 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 UBDO15205 165 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 TGDSO95455 350 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 ANP32DO95626 131 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 ALDOCP09972 364 aaKnown RBP18.39■□□□□ 0.53
SNX13-206ENST00000474067 OR12D1P0DN82 309 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 POU2F1P14859 743 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 PPP3CBP16298 524 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 PSMA4P25789 261 aaKnown RBP18.39■□□□□ 0.53
SNX13-206ENST00000474067 KRTAP10-9P60411 292 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 UFM1P61960 85 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 RPS26P62854 115 aaKnown RBP18.39■□□□□ 0.53
SNX13-206ENST00000474067 SIRPAP78324 504 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 FOXF1Q12946 379 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 GPAT3Q53EU6 434 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 TNFAIP8L2Q6P589 184 aaPredicted RBP18.39■□□□□ 0.53
SNX13-206ENST00000474067 CMIPQ8IY22 773 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 ZNF619Q8N2I2 560 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 ROPN1LQ96C74 230 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 ATP6V1G3Q96LB4 118 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 C7orf26Q96N11 449 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 WDR55Q9H6Y2 383 aaPredicted RBP18.39■□□□□ 0.53
SNX13-206ENST00000474067 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.39■□□□□ 0.53
SNX13-206ENST00000474067 CALML5Q9NZT1 146 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 KCNE3Q9Y6H6 103 aa18.39■□□□□ 0.53
SNX13-206ENST00000474067 CCDC154A6NI56 674 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 TNFSF11O14788 317 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 KIAA0513O60268 411 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 PRKCAP17252 672 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 IL11P20809 199 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 DNASE1P24855 282 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 KIR2DL2P43627 348 aaPredicted RBP18.38■□□□□ 0.53
SNX13-206ENST00000474067 SLC6A8P48029 635 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 SLC25A53Q5H9E4 307 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.38■□□□□ 0.53
SNX13-206ENST00000474067 AP1ARQ63HQ0 302 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 ZNF621Q6ZSS3 439 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 BEND4Q6ZU67 534 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 HDXQ7Z353 690 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 SLC43A2Q8N370 569 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 RFWD2Q8NHY2 731 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 FBXO27Q8NI29 283 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 GPR119Q8TDV5 335 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 SLC25A43Q8WUT9 341 aaPredicted RBP18.38■□□□□ 0.53
SNX13-206ENST00000474067 NUDT8Q8WV74 236 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 ZNF75CPQ92670 426 aaPredicted RBP18.38■□□□□ 0.53
SNX13-206ENST00000474067 OSTF1Q92882 214 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 ADGRG7Q96K78 797 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 TRNT1Q96Q11 434 aaKnown RBP18.38■□□□□ 0.53
SNX13-206ENST00000474067 SAP130Q9H0E3 1048 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 MKLN1Q9UL63 735 aa18.38■□□□□ 0.53
SNX13-206ENST00000474067 APCP25054 2843 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms