RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 ZNF10P21506 573 aaPredicted RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 PAICSP22234 425 aaKnown RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CA6P23280 308 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 PPP2R1AP30153 589 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 MNDAP41218 407 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CCT3P49368 545 aaKnown RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 BCAP31P51572 246 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ZNF75DP51815 510 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 EMP2P54851 167 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 RAB11AP62491 216 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 HSPB3Q12988 150 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ILKQ13418 452 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ART3Q13508 389 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 TPSAB1Q15661 275 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ALX1Q15699 326 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 USF2Q15853 346 aaPredicted RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 RAB11BQ15907 218 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 LPAL2Q16609 132 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 EXOC3L2Q2M3D2 409 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 SGSM1Q2NKQ1 1148 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 TMEM44Q2T9K0 475 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ITPRIPL2Q3MIP1 535 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ADAMTSL4-AS1Q5T5F5 129 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 RNLSQ5VYX0 342 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 MFSD14CQ5VZR4 134 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 TTC23Q5W5X9 447 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 SLC39A4Q6P5W5 647 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CCDC137Q6PK04 289 aaKnown RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 FAM159AQ6UWV7 190 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 LINGO4Q6UY18 593 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ASCL4Q6XD76 172 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 VTCN1Q7Z7D3 282 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 LHFPL4Q7Z7J7 247 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 LUZP2Q86TE4 346 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 PIGZQ86VD9 579 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 PAQR7Q86WK9 346 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 STX12Q86Y82 276 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 VSTM4Q8IW00 320 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CCDC36Q8IYA8 594 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 UBQLNLQ8IYU4 475 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 MCOLN2Q8IZK6 566 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 THEM5Q8N1Q8 247 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ZNF611Q8N823 705 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ICA1LQ8NDH6 482 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 OR11H4Q8NGC9 324 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 OR5M1Q8NGP8 315 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 OR2T11Q8NH01 316 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CHPT1Q8WUD6 406 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ARNTL2Q8WYA1 636 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 PHYHIPQ92561 330 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 MCHR2Q969V1 340 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 RAD51AP1Q96B01 352 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 TM4SF19Q96DZ7 209 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 OTUB1Q96FW1 271 aaPredicted RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CDKN2AIPNLQ96HQ2 116 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 RASL10BQ96S79 203 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CPNE1Q99829 537 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 OPRPNQ99935 248 aaPredicted RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 TMEM246Q9BRR3 403 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 PELOQ9BRX2 385 aaKnown RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ATG101Q9BSB4 218 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ROPN1BQ9BZX4 212 aaPredicted RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ZMYND12Q9H0C1 365 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 OPN3Q9H1Y3 402 aaPredicted RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 GAL3ST2Q9H3Q3 398 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 FN3KQ9H479 309 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 DPEP3Q9H4B8 488 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ASB8Q9H765 288 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 COG4Q9H9E3 785 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 MEAF6Q9HAF1 191 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CSNK1G1Q9HCP0 422 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ZNF302Q9NR11 478 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 MRPL17Q9NRX2 175 aaKnown RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 TREX1Q9NSU2 369 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ZCCHC3Q9NUD5 404 aaKnown RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 C2orf42Q9NWW7 574 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 TAS2R7Q9NYW3 318 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 ADAM22Q9P0K1 906 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 RNF150Q9ULK6 438 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 TNNQ9UQP3 1299 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 EXOGQ9Y2C4 368 aaKnown RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 RBMX2Q9Y388 322 aaKnown RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 MUC3AQ02505 3323 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CPDO75976 1380 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 KDM6AO15550 1401 aaPredicted RBP3.1□□□□□ -1.91
CCDC58-203ENST00000466854 USP6P35125 1406 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 CENPFP49454 3210 aa3.1□□□□□ -1.91
CCDC58-203ENST00000466854 LAMA3Q16787 3333 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 A0A087WUV0 522 aaPredicted RBP3.09□□□□□ -1.91
CCDC58-203ENST00000466854 A0A087X0K7 114 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 GOLGA8QA0A0J9YX86 632 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 LOC390937A0A1W2PQ73 354 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 CCDC162PA2VCL2 907 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 WASHC1A8K0Z3 465 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 PDZK1P1A8MUH7 402 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 E9PQ18 207 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 GOLGA8RI6L899 631 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 ARPC3O15145 178 aa3.09□□□□□ -1.91
CCDC58-203ENST00000466854 COCHO43405 550 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms