RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 KRTAP27-1Q3LI81 207 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 TIGITQ495A1 244 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 GGTA1PQ4G0N0 100 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 PAGE2BQ5JRK9 111 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZNF658Q5TYW1 1059 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 KDELC1Q6UW63 502 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 DNM1P46Q6ZS02 220 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 RGS9BPQ6ZS82 235 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 KIAA1328Q86T90 577 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 MOB3BQ86TA1 216 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 APOBEC3FQ8IUX4 373 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 LINC01561Q8N1V8 128 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 DHRSXQ8N5I4 330 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 STXBP6Q8NFX7 210 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 GTSF1Q8WW33 167 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 ARNTL2Q8WYA1 636 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 RPL3LQ92901 407 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 AMDHD1Q96NU7 426 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 TGM7Q96PF1 710 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 CCT7Q99832 543 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 C19orf24Q9BVV8 132 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZNF385DQ9H6B1 395 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 RPS10P5Q9NQ39 176 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 NUDT15Q9NV35 164 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 APOBEC3BQ9UH17 382 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 RASD1Q9Y272 281 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 USP16Q9Y5T5 823 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 FLVCR1Q9Y5Y0 555 aa3.28□□□□□ -1.88
CDC42BPA-211ENST00000466538 LOC100131303A0A0U1RQF7 123 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 FRG2CA6NGY1 282 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 H3BMQ9 156 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 ARPC3O15145 178 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 N4BP1O75113 896 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 SRSF10O75494 262 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 ECI2O75521 394 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 SCGNO76038 276 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 CYP2B6P20813 491 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 ADORA2BP29275 332 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 CD80P33681 288 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 HPCAL1P37235 193 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 KIR2DS2P43631 304 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 STARP49675 285 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 SBK1Q52WX2 424 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 CASC1Q6TDU7 716 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 HPS6Q86YV9 775 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 SLC38A6Q8IZM9 456 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZNF525Q8N782 197 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 OR13F1Q8NGS4 319 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 OR2A12Q8NGT7 310 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 MRAPQ8TCY5 172 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 ZNF606Q8WXB4 792 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 BADQ92934 168 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 PSMG2Q969U7 264 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 KIR2DL4Q99706 377 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 NIPSNAP3BQ9BS92 247 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 KRTAP17-1Q9BYP8 105 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 NAT10Q9H0A0 1025 aaKnown RBP3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 LRRC40Q9H9A6 602 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 APMAPQ9HDC9 416 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 PCSK1NQ9UHG2 260 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 RIMS3Q9UJD0 308 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 SCML2Q9UQR0 700 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 PDE10AQ9Y233 779 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 PPIAL4AQ9Y536 164 aa3.27□□□□□ -1.89
CDC42BPA-211ENST00000466538 HCFC1P51610 2035 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 SYNJ2BP-COX16A0A087WUM0 186 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 FAM168BA1KXE4 195 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 PCP4L1A6NKN8 68 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 E7ESA3 106 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 WWP2O00308 870 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 CDX4O14627 284 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 PHOX2AO14813 284 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 RS1O15537 224 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 SNNO75324 88 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 MTX2O75431 263 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 GPX5O75715 221 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 SERF1AO75920 110 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 LRATO95237 230 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 IL2RGP31785 369 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 UGT1A3P35503 534 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 TDO2P48775 406 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 TAF6P49848 677 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 P2RY4P51582 365 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 MAP2K1Q02750 393 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 NCBP1Q09161 790 aaKnown RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 CHIT1Q13231 466 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 KIAA0040Q15053 153 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 EXOC3L2Q2M3D2 409 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 OR2B11Q5JQS5 317 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 ATF7IP2Q5U623 682 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 LIPNQ5VXI9 398 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 WSCD1Q658N2 575 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 CENPPQ6IPU0 288 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 NLRP9Q7RTR0 991 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 TPRA1Q86W33 373 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 C17orf82Q86X59 251 aaPredicted RBP3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 CCDC50Q8IVM0 306 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 GPR65Q8IYL9 337 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 CLEC4FQ8N1N0 589 aa3.26□□□□□ -1.89
CDC42BPA-211ENST00000466538 MTURNQ8N3F0 131 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms