RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 RAB7BQ96AH8 199 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 HAVCR1Q96D42 359 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 NICN1Q9BSH3 213 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 OR1A1Q9P1Q5 309 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 FOXJ3Q9UPW0 622 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 AP4B1Q9Y6B7 739 aa3.98□□□□□ -1.77
PTCD3-205ENST00000464541 PINLYPA6NC86 204 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 TRIM49D1C9J1S8 452 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 STX11O75558 287 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 TOM1L1O75674 476 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 TGFAP01135 160 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 NR2C1P13056 603 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 GABRR1P24046 479 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 AXLP30530 894 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 MDH1P40925 334 aaKnown RBP3.97□□□□□ -1.77
PTCD3-205ENST00000464541 RPS8P62241 208 aaKnown RBP3.97□□□□□ -1.77
PTCD3-205ENST00000464541 BDH1Q02338 343 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 PSG7Q13046 419 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 IL17AQ16552 155 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 IMMTQ16891 758 aaKnown RBP3.97□□□□□ -1.77
PTCD3-205ENST00000464541 FILIP1LQ4L180 1135 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 ATAD3BQ5T9A4 648 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 CENPPQ6IPU0 288 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 DNM1P46Q6ZS02 220 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 OR56B2PQ8NGI1 322 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 OR2A12Q8NGT7 310 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 NEIL2Q969S2 332 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 ZNF799Q96GE5 643 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 VSTM2LQ96N03 204 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 GSDMAQ96QA5 445 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 TMEM121Q9BTD3 319 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 PTGES2Q9H7Z7 377 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 CAB39LQ9H9S4 337 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 TM9SF3Q9HD45 589 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 ATP6V1HQ9UI12 483 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 PRO0461Q9UI25 63 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 PTBP2Q9UKA9 531 aaKnown RBP3.97□□□□□ -1.77
PTCD3-205ENST00000464541 SNX6Q9UNH7 406 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 PPIAL4AQ9Y536 164 aa3.97□□□□□ -1.77
PTCD3-205ENST00000464541 ABCC4O15439 1325 aa3.96□□□□□ -1.77
PTCD3-205ENST00000464541 NCF1P14598 390 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-205ENST00000464541 HOXD10P28358 340 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 GDI1P31150 447 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 KIR2DS2P43631 304 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 ATP5OP48047 213 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 STARP49675 285 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 CCNA1P78396 465 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 EGFEM1PQ0D2K5 195 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 ELP6Q0PNE2 266 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 CUL2Q13617 745 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 PPP1R7Q15435 360 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 ZNF530Q6P9A1 599 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-205ENST00000464541 EGFL6Q8IUX8 553 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 LINC01555Q8NAE3 123 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 OR5AU1Q8NGC0 362 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 SDSLQ96GA7 329 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 POLR3FQ9H1D9 316 aaPredicted RBP3.96□□□□□ -1.78
PTCD3-205ENST00000464541 PPDPFQ9H3Y8 114 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 CLSTN2Q9H4D0 955 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 NGBQ9NPG2 151 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 ZNF221Q9UK13 617 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 WDR45Q9Y484 360 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 U3KQV3 271 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 PARD3Q8TEW0 1356 aa3.96□□□□□ -1.78
PTCD3-205ENST00000464541 SMIM28A0A1B0GU29 152 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 LRRIQ4A6NIV6 560 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 ANKRD30BLA7E2S9 258 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 MAGEB3O15480 346 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 CLDN3O15551 220 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 GPX5O75715 221 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 MMP23AO75900 390 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 DIRAS3O95661 229 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 ANXA3P12429 323 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 IGLL1P15814 213 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 XRCC1P18887 633 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-205ENST00000464541 DNAJB1P25685 340 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 ATP5A1P25705 553 aaKnown RBP3.95□□□□□ -1.78
PTCD3-205ENST00000464541 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 SOX6P35712 828 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 NOVA1P51513 510 aaKnown RBP3.95□□□□□ -1.78
PTCD3-205ENST00000464541 CKAP4Q07065 602 aaKnown RBP3.95□□□□□ -1.78
PTCD3-205ENST00000464541 MXD4Q14582 209 aaPredicted RBP3.95□□□□□ -1.78
PTCD3-205ENST00000464541 AANATQ16613 207 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 CFAP221Q4G0U5 840 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 RAET1GQ6H3X3 334 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 LRRC43Q8N309 656 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 MNS1Q8NEH6 495 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 OR9A1PQ8NGU1 263 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 RNF139Q8WU17 664 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 RNF138Q8WVD3 245 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 TRUB1Q8WWH5 349 aaKnown RBP3.95□□□□□ -1.78
PTCD3-205ENST00000464541 MARC2Q969Z3 335 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 PLIN2Q99541 437 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 ERP44Q9BS26 406 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 TPPP3Q9BW30 176 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 SOHLH2Q9NX45 425 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 MARCH5Q9NX47 278 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 HOXC10Q9NYD6 342 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 CFAP45Q9UL16 551 aa3.95□□□□□ -1.78
PTCD3-205ENST00000464541 LRRK1Q38SD2 2015 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms