RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 C7orf72A4D263 438 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 FAM187AA6NFU0 413 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 MYO1GB0I1T2 1018 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ZNF814B7Z6K7 855 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ALG1L2C9J202 215 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 E7EQL1 145 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 H3BNH8 94 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 H7C417 338 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 PPP6CO00743 305 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 CRCPO75575 148 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 INHBAP08476 426 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 RPS17P08708 135 aaKnown RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 PRPS2P11908 318 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 CHN1P15882 459 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ITGA2P17301 1181 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 TAC1P20366 129 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ATP6V1C1P21283 382 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ENPP1P22413 925 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 PTAFRP25105 342 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ELK4P28324 431 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 SHC1P29353 583 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 GSTM5P46439 218 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 OR3A2P47893 321 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 PRIM2P49643 509 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 RNF144AP50876 292 aaPredicted RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 SNRPD2P62316 118 aaKnown RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 RAE1P78406 368 aaKnown RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 CAV1Q03135 178 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 CLCQ05315 142 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 RASGEF1BQ0VAM2 473 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 CR1LQ2VPA4 569 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 UBAP2Q5T6F2 1119 aaKnown RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 Q6ZSR9 355 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 P2RY8Q86VZ1 359 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 OR2L13Q8N349 312 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 SLC43A2Q8N370 569 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 RFLNBQ8N5W9 214 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 C3orf56Q8N813 242 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ZNF527Q8NB42 609 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 SPATA4Q8NEY3 305 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 OR4C3Q8NH37 302 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ZFP28Q8NHY6 868 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 FAM110BQ8TC76 370 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 PHOSPHO1Q8TCT1 267 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ACTRT2Q8TDY3 377 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ZNF483Q8TF39 744 aaPredicted RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 ARL8AQ96BM9 186 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 MSI2Q96DH6 328 aaKnown RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 ELP4Q96EB1 424 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 OTUB1Q96FW1 271 aaPredicted RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 GPR78Q96P69 363 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 VRK1Q99986 396 aaPredicted RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 KCNS3Q9BQ31 491 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 INPP5KQ9BT40 448 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 C1QTNF6Q9BXI9 259 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 ACPTQ9BZG2 426 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 RAB17Q9H0T7 212 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 MRPL46Q9H2W6 279 aaKnown RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 FKRPQ9H9S5 495 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 GP6Q9HCN6 339 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 UBQLN4Q9NRR5 601 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 NPAP1Q9NZP6 1156 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 EMC3Q9P0I2 261 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 TRAF6Q9Y4K3 522 aa6.97□□□□□ -1.29
HPS4-207ENST00000459918 POLR3HQ9Y535 204 aaPredicted RBP6.97□□□□□ -1.29
HPS4-207ENST00000459918 CADP27708 2225 aa6.96□□□□□ -1.29
HPS4-207ENST00000459918 SVEP1Q4LDE5 3571 aa6.96□□□□□ -1.29
HPS4-207ENST00000459918 A0A1W2PNR3 127 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 OR5H1A6NKK0 313 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 TTC36A6NLP5 189 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 A8MT66 165 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 KIF2AO00139 706 aaPredicted RBP6.96□□□□□ -1.3
HPS4-207ENST00000459918 GTPBP1O00178 669 aaKnown RBP6.96□□□□□ -1.3
HPS4-207ENST00000459918 NDUFS8O00217 210 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 PDPK1O15530 556 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 IGKV1D-16P01601 117 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 THBS1P07996 1170 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 ALOX5P09917 674 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 CTAGE8P0CG41 777 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 CREB1P16220 341 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 IGHV1-2P23083 117 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 PSMA4P25789 261 aaKnown RBP6.96□□□□□ -1.3
HPS4-207ENST00000459918 CD40P25942 277 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 CFPP27918 469 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 NR4A2P43354 598 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 SERPINB4P48594 390 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 MANFP55145 182 aaKnown RBP6.96□□□□□ -1.3
HPS4-207ENST00000459918 SELENBP1Q13228 472 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 ARL13AQ5H913 290 aaPredicted RBP6.96□□□□□ -1.3
HPS4-207ENST00000459918 CCNJQ5T5M9 372 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 C11orf71Q6IPW1 123 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 ZNF544Q6NX49 715 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 KLHL24Q6TFL4 600 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 ZDHHC24Q6UX98 284 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 SEZ6L2Q6UXD5 910 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 RINLQ6ZS11 566 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 ZNF551Q7Z340 670 aaPredicted RBP6.96□□□□□ -1.3
HPS4-207ENST00000459918 SLC46A3Q7Z3Q1 461 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 GALNT5Q7Z7M9 940 aa6.96□□□□□ -1.3
HPS4-207ENST00000459918 MEX3DQ86XN8 651 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms