RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 NSDHLQ15738 373 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 PRICKLE4Q2TBC4 344 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 YIF1BQ5BJH7 314 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 ARMC4Q5T2S8 1044 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 TIGD3Q6B0B8 471 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 CYP4Z2PQ8N1L4 340 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 OR2L13Q8N349 312 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 VWA5B2Q8N398 1253 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 PSD4Q8NDX1 1056 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 PLPP5Q8NEB5 264 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 OR7G2Q8NG99 324 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 METTL21AQ8WXB1 218 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 RNF170Q96K19 258 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 DHRS1Q96LJ7 313 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 Q96MT0 163 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 VN1R1Q9GZP7 353 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 SLC22A4Q9H015 551 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 RUBCNLQ9H714 662 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 WDR54Q9H977 334 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 IMPAD1Q9NX62 359 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 NTMQ9P121 344 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 STUB1Q9UNE7 303 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 C19orf53Q9UNZ5 99 aaPredicted RBP14.69□□□□□ -0.06
SNX17-204ENST00000453453 SATB2Q9UPW6 733 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 FAM186AA6NE01 2351 aa14.69□□□□□ -0.06
SNX17-204ENST00000453453 IGKV3D-11A0A0A0MRZ8 115 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 ALPPP05187 535 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 ETFAP13804 333 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 CHMP24386 653 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 SCN1BQ07699 218 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 MAP4K2Q12851 820 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 TARDBPQ13148 414 aaKnown RBP eCLIP14.68□□□□□ -0.06
SNX17-204ENST00000453453 MICAQ29983 383 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 COX20Q5RI15 118 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 CCNJQ5T5M9 372 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 FAM111BQ6SJ93 734 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 C6orf15Q6UXA7 325 aaPredicted RBP14.68□□□□□ -0.06
SNX17-204ENST00000453453 SLC30A8Q8IWU4 369 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 PEX5LQ8IYB4 626 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 C11orf65Q8NCR3 313 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 OR10Q1Q8NGQ4 319 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 SLC7A6Q92536 515 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 TSLPQ969D9 159 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 UBE2FQ969M7 185 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 MGLLQ99685 303 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 B3GNT4Q9C0J1 378 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 ZNF556Q9HAH1 456 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 ADAP2Q9NPF8 381 aa14.68□□□□□ -0.06
SNX17-204ENST00000453453 PNO1Q9NRX1 252 aaKnown RBP14.68□□□□□ -0.06
SNX17-204ENST00000453453 TCRBV16S1A1N1A0A5B0 115 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 OR2W5A6NFC9 320 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 HMGN2P05204 90 aaKnown RBP14.67□□□□□ -0.06
SNX17-204ENST00000453453 SCG5P05408 212 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 HLA-DMAP28067 261 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 MVDP53602 400 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 CASP9P55211 416 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 SELENOWP63302 87 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 RIPPLY1Q0D2K3 151 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 ZNF267Q14586 743 aaPredicted RBP14.67□□□□□ -0.06
SNX17-204ENST00000453453 LASP1Q14847 261 aaKnown RBP14.67□□□□□ -0.06
SNX17-204ENST00000453453 ELAVL1Q15717 326 aaKnown RBP14.67□□□□□ -0.06
SNX17-204ENST00000453453 IFI44LQ53G44 452 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 PLAG1Q6DJT9 500 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 TNFAIP8L2Q6P589 184 aaPredicted RBP14.67□□□□□ -0.06
SNX17-204ENST00000453453 TMPRSS11AQ6ZMR5 421 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 SPATC1Q76KD6 591 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 NRARPQ7Z6K4 114 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 NOXA1Q86UR1 476 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 TCTE3Q8IZS6 198 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 RDH10Q8IZV5 341 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 OR8H2Q8N162 312 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 GDPD1Q8N9F7 314 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 ART5Q96L15 291 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 FEVQ99581 238 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 TMEM246Q9BRR3 403 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 TMEM121BQ9BXQ6 578 aaPredicted RBP14.67□□□□□ -0.06
SNX17-204ENST00000453453 ACTRT3Q9BYD9 372 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 TMEM38AQ9H6F2 299 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 EQTNQ9NQ60 294 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 GPATCH2Q9NW75 528 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 CLN6Q9NWW5 311 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 PADI1Q9ULC6 663 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 CLDN16Q9Y5I7 305 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 CLCA3PQ9Y6N3 262 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 V9GYH0 126 aa14.67□□□□□ -0.06
SNX17-204ENST00000453453 MEIOCA2RUB1 952 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 VSTM2BA6NLU5 285 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 C17orf105B2RV13 164 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 IDSB3KWA1 339 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 TNFRSF21O75509 655 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 DIRAS1O95057 198 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 AGR2O95994 175 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 C1QCP02747 245 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 IL7P13232 177 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 SDHBP21912 280 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 ERP29P30040 261 aaKnown RBP14.66□□□□□ -0.06
SNX17-204ENST00000453453 RFX2P48378 723 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 RORCP51449 518 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 EMP2P54851 167 aa14.66□□□□□ -0.06
SNX17-204ENST00000453453 RPS26P62854 115 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms