RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 GTPBP8Q8N3Z3 284 aaPredicted RBP14.2□□□□□ -0.14
TOP3B-211ENST00000449704 GPR119Q8TDV5 335 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 OIT3Q8WWZ8 545 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 MAL2Q969L2 176 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 ZBTB8AQ96BR9 441 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 ARSGQ96EG1 525 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 RNF145Q96MT1 663 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 CGREF1Q99674 301 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 NPAS1Q99742 590 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 TUBA1CQ9BQE3 449 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 CPPED1Q9BRF8 314 aaPredicted RBP14.2□□□□□ -0.14
TOP3B-211ENST00000449704 THUMPD3Q9BV44 507 aaKnown RBP14.2□□□□□ -0.14
TOP3B-211ENST00000449704 IKZF5Q9H5V7 419 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 CORO2BQ9UQ03 480 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 SLC35A3Q9Y2D2 325 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 FREM3P0C091 2139 aa14.2□□□□□ -0.14
TOP3B-211ENST00000449704 FBP2O00757 339 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 CCDC22O60826 627 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 BCAS1O75363 584 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-211ENST00000449704 EPPINO95925 133 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 OPN1LWP04000 364 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 DBIP07108 87 aaKnown RBP14.19□□□□□ -0.14
TOP3B-211ENST00000449704 LINGO3P0C6S8 592 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 IL7RP16871 459 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 ZNF708P17019 499 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 RYKP34925 604 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 PGM1P36871 562 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 ADH7P40394 386 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 FOXF1Q12946 379 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 SKP2Q13309 424 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 CAPRIN1Q14444 709 aaKnown RBP14.19□□□□□ -0.14
TOP3B-211ENST00000449704 TOMM34Q15785 309 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-211ENST00000449704 TMEM44Q2T9K0 475 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 MAMDC2Q7Z304 686 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-211ENST00000449704 MEIOBQ8N635 442 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 FBXO27Q8NI29 283 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 POC1BQ8TC44 478 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 ZPLD1Q8TCW7 415 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 CA5BP1Q8WTZ4 195 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 WDR60Q8WVS4 1066 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 PMM1Q92871 262 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 TREX2Q9BQ50 279 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-211ENST00000449704 TRIM8Q9BZR9 551 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 CACYBPQ9HB71 228 aaKnown RBP14.19□□□□□ -0.14
TOP3B-211ENST00000449704 A4GALTQ9NPC4 353 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 STOML1Q9UBI4 398 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 PLEKHB1Q9UF11 243 aaPredicted RBP14.19□□□□□ -0.14
TOP3B-211ENST00000449704 RNF6Q9Y252 685 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 AP4B1Q9Y6B7 739 aa14.19□□□□□ -0.14
TOP3B-211ENST00000449704 ICE1Q9Y2F5 2266 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 MAST4O15021 2626 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 A0A0G2JPF8 293 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 HNRNPCL2B2RXH8 293 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 HNRNPCL3B7ZW38 293 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 H0YC42 278 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 MRASO14807 208 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 HNRNPCL1O60812 293 aaKnown RBP14.18□□□□□ -0.14
TOP3B-211ENST00000449704 HNRNPCL4P0DMR1 293 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 BMP2P12643 396 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 ZNF17P17021 662 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 GPX2P18283 190 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 AGAP20933 346 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 ADSLP30566 484 aaPredicted RBP14.18□□□□□ -0.14
TOP3B-211ENST00000449704 EIF1P41567 113 aaKnown RBP14.18□□□□□ -0.14
TOP3B-211ENST00000449704 TPD52P55327 224 aaPredicted RBP14.18□□□□□ -0.14
TOP3B-211ENST00000449704 CLDN20P56880 219 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 MTPNP58546 118 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 CYLC2Q14093 348 aaPredicted RBP14.18□□□□□ -0.14
TOP3B-211ENST00000449704 QPRTQ15274 297 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 NSUN5P2Q63ZY6 315 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 REP15Q6BDI9 236 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 PLXDC2Q6UX71 529 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 SEM1Q6ZVN7 128 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 MTDHQ86UE4 582 aaKnown RBP14.18□□□□□ -0.14
TOP3B-211ENST00000449704 VRK2Q86Y07 508 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 LACC1Q8IV20 430 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 C10orf111Q8N326 155 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 OR52P1PQ8NH57 321 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 NFKBIDQ8NI38 313 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 ASB5Q8WWX0 329 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 CNOT9Q92600 299 aaKnown RBP14.18□□□□□ -0.14
TOP3B-211ENST00000449704 ANKRD27Q96NW4 1050 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 TMEM185BQ9H7F4 350 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 CALHM2Q9HA72 323 aa14.18□□□□□ -0.14
TOP3B-211ENST00000449704 A0A0G2JNJ9 132 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 C7orf72A4D263 438 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 CD8B2A6NJW9 211 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 CLCA1A8K7I4 914 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 BBIP1A8MTZ0 92 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 SNX3O60493 162 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 CLDN14O95500 239 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 IL2RAP01589 272 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 ARAFP10398 606 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 NID1P14543 1247 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 PGCP20142 388 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 RPS4Y1P22090 263 aaKnown RBP14.17□□□□□ -0.14
TOP3B-211ENST00000449704 ME2P23368 584 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 CHRNB4P30926 498 aa14.17□□□□□ -0.14
TOP3B-211ENST00000449704 SUCLG1P53597 346 aaKnown RBP14.17□□□□□ -0.14
TOP3B-211ENST00000449704 EEFSECP57772 596 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms