RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 GAS2L1Q99501 681 aaPredicted RBP16.49■□□□□ 0.23
CLDN9-201ENST00000445369 TIMP4Q99727 224 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 LMF2Q9BU23 707 aaKnown RBP16.49■□□□□ 0.23
CLDN9-201ENST00000445369 HDHD5Q9BXW7 423 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 SEMA6CQ9H3T2 930 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 MEPEQ9NQ76 525 aaPredicted RBP16.49■□□□□ 0.23
CLDN9-201ENST00000445369 CMC2Q9NRP2 79 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 TDRD6O60522 2096 aaKnown RBP16.49■□□□□ 0.23
CLDN9-201ENST00000445369 CEP290O15078 2479 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 A0A0B4J2E0 115 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 A0A1B0GX12 115 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 SHISA3A0PJX4 238 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 ZC3H12DA2A288 527 aaKnown RBP16.49■□□□□ 0.23
CLDN9-201ENST00000445369 POLR1CO15160 346 aaPredicted RBP16.49■□□□□ 0.23
CLDN9-201ENST00000445369 SEC14L5O43304 696 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 IGLV3-19P01714 112 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 CSF3P09919 207 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 S1PR1P21453 382 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 GALP22466 123 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 BMP8BP34820 402 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 SCN1BQ07699 218 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 SLC35F1Q5T1Q4 408 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 BMP8AQ7Z5Y6 402 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 UBQLNLQ8IYU4 475 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 CDK20Q8IZL9 346 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 SMRP1Q8NCR6 262 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 NEIL3Q8TAT5 605 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 ABHD8Q96I13 439 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 NECTIN4Q96NY8 510 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 ISG20L2Q9H9L3 353 aaKnown RBP16.49■□□□□ 0.23
CLDN9-201ENST00000445369 TMEM27Q9HBJ8 222 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 FLRT3Q9NZU0 649 aa16.49■□□□□ 0.23
CLDN9-201ENST00000445369 CHP2O43745 196 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 OR10H2O60403 315 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 RFPL3O75679 317 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 GUSBP08236 651 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 THEGLP0DJG4 465 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 TYRP1P17643 537 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 OR2B6P58173 313 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 PPP3R1P63098 170 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 FOXK2Q01167 660 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 ASAH1Q13510 395 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 INSL4Q14641 139 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 KCNJ8Q15842 424 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 PDZK1Q5T2W1 519 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 GRAMD2AQ8IUY3 354 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 TMEM99Q8N816 258 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 NACC2Q96BF6 587 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 ALG8Q9BVK2 526 aa16.48■□□□□ 0.23
CLDN9-201ENST00000445369 FAM86C2PA6NEL3 165 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 CCDC182A6NF36 153 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 SOX30O94993 753 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 SAGP10523 405 aaPredicted RBP16.47■□□□□ 0.23
CLDN9-201ENST00000445369 TMEM91Q6ZNR0 172 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 C19orf47Q8N9M1 422 aaKnown RBP16.47■□□□□ 0.23
CLDN9-201ENST00000445369 SLC37A3Q8NCC5 494 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 GRHL3Q8TE85 626 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 ATF6BQ99941 703 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 ZNF426Q9BUY5 554 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 IFT27Q9BW83 186 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 FOLH1BQ9HBA9 442 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 CYP8B1Q9UNU6 501 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 CD8B2A6NJW9 211 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 TMCC2O75069 709 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 ADAM11O75078 769 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 PTP4A3O75365 173 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 IGKV1D-16P01601 117 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 CD8BP10966 210 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 EMDP50402 254 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 C1orf61Q13536 156 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 TAB1Q15750 504 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 ARMC6Q6NXE6 501 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 ZC3H14Q6PJT7 736 aaKnown RBP16.47■□□□□ 0.23
CLDN9-201ENST00000445369 ZNF517Q6ZMY9 492 aaPredicted RBP16.47■□□□□ 0.23
CLDN9-201ENST00000445369 PTP4A1Q93096 173 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 EFHD2Q96C19 240 aaPredicted RBP16.47■□□□□ 0.23
CLDN9-201ENST00000445369 TOE1Q96GM8 510 aaKnown RBP16.47■□□□□ 0.23
CLDN9-201ENST00000445369 GDF15Q99988 308 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 RBCK1Q9BYM8 510 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 CAPN10Q9HC96 672 aa16.47■□□□□ 0.23
CLDN9-201ENST00000445369 DNAJB12Q9NXW2 375 aaKnown RBP16.47■□□□□ 0.23
CLDN9-201ENST00000445369 TRAV27A0A087WT01 109 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 A0A1B0GWA3 101 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 SLC22A31A6NKX4 558 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 PRR23D1E9PI22 279 aaPredicted RBP16.46■□□□□ 0.23
CLDN9-201ENST00000445369 TGFBR3LH3BV60 316 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 RNF13O43567 381 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 HCN1O60741 890 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 PRR23D2P0DMB1 279 aaPredicted RBP16.46■□□□□ 0.23
CLDN9-201ENST00000445369 CTSEP14091 401 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 ACAA2P42765 397 aaKnown RBP16.46■□□□□ 0.23
CLDN9-201ENST00000445369 HTR3AP46098 478 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 RFX3P48380 749 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 PRTGQ2VWP7 1150 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 ZNF362Q5T0B9 420 aaPredicted RBP16.46■□□□□ 0.23
CLDN9-201ENST00000445369 SLC44A3Q8N4M1 653 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 ZNF614Q8N883 585 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 ZDHHC1Q8WTX9 485 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 SOSTQ9BQB4 213 aa16.46■□□□□ 0.23
CLDN9-201ENST00000445369 HOXD1Q9GZZ0 328 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms