RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ZNF433Q8N7K0 673 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 OR52E2Q8NGJ4 325 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 BPIFA2Q96DR5 249 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 TOE1Q96GM8 510 aaKnown RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 GAL3ST4Q96RP7 486 aa12.39□□□□□ -0.43
MCF2L-213ENST00000421756 MTHFD2LQ9H903 347 aaPredicted RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 CCDC59Q9P031 241 aaKnown RBP12.39□□□□□ -0.43
MCF2L-213ENST00000421756 IDH3BO43837 385 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 PRICKLE3O43900 615 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-213ENST00000421756 GSTM3P21266 225 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 HNRNPA2B1P22626 353 aaKnown RBP12.38□□□□□ -0.43
MCF2L-213ENST00000421756 DMPKQ09013 629 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 FAM53BQ14153 422 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 USP53Q70EK8 1073 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 RANBP3LQ86VV4 465 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-213ENST00000421756 CDK20Q8IZL9 346 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 KLHL36Q8N4N3 616 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 TSSK2Q96PF2 358 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 ALG8Q9BVK2 526 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 PPIL3Q9H2H8 161 aaKnown RBP12.38□□□□□ -0.43
MCF2L-213ENST00000421756 PLEKHB1Q9UF11 243 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-213ENST00000421756 V9GYH0 126 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 TRAV6A0A075B6T7 132 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 UNC119BA6NIH7 251 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 DUXAA6NLW8 204 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 H7C1C5 153 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 RAD1O60671 282 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 STX11O75558 287 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 THEGLP0DJG4 465 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 LCN6P62502 163 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 SAMD12Q8N8I0 201 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 PIGKQ92643 395 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 MMABQ96EY8 250 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-213ENST00000421756 C10orf90Q96M02 699 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 ERMAPQ96PL5 475 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-213ENST00000421756 PAQR5Q9NXK6 330 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-213ENST00000421756 ZNF221Q9UK13 617 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 GTF2A1LQ9UNN4 478 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 SPACA6W5XKT8 324 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 FAM240BA0A1B0GVZ2 78 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 IDSB3KWA1 339 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 SURF4O15260 269 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 ZGLP1P0C6A0 271 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 BNC1Q01954 994 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 SCN1BQ07699 218 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 DSG2Q14126 1118 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 MEDAGQ5VYS4 303 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 RBM12BQ8IXT5 1001 aaKnown RBP12.38□□□□□ -0.43
MCF2L-213ENST00000421756 CAMKVQ8NCB2 501 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 OR5M3Q8NGP4 307 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 OSTF1Q92882 214 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 C4orf36Q96KX1 117 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 MSRAQ9UJ68 235 aa12.38□□□□□ -0.43
MCF2L-213ENST00000421756 COL4A3Q01955 1670 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 PRR23D1E9PI22 279 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-213ENST00000421756 DOK2O60496 412 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 SEMA4FO95754 770 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 NUDT14O95848 222 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 CSF3P09919 207 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 PRR23D2P0DMB1 279 aaPredicted RBP12.37□□□□□ -0.43
MCF2L-213ENST00000421756 RFX2P48378 723 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 SRP9P49458 86 aaKnown RBP12.37□□□□□ -0.43
MCF2L-213ENST00000421756 ZNF620Q6ZNG0 422 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 ABHD13Q7L211 337 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 OR8K3Q8NH51 312 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 OR4C6Q8NH72 309 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 ITFG2Q969R8 447 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 SLC35B4Q969S0 331 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 SLC25A46Q96AG3 418 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 PPP1R14BQ96C90 147 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 TGM7Q96PF1 710 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 LRIT1Q9P2V4 623 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 ACAD8Q9UKU7 415 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 MEIOCA2RUB1 952 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 CHST10O43529 356 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 MRPS14O60783 128 aaKnown RBP12.37□□□□□ -0.43
MCF2L-213ENST00000421756 OCLNQ16625 522 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 ZFP69Q49AA0 526 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 ALG10BQ5I7T1 473 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 SERPINA12Q8IW75 414 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 SLC37A3Q8NCC5 494 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 C17orf47Q8NEP4 570 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 IL17RDQ8NFM7 739 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 MAP3K3Q99759 626 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 CPNE5Q9HCH3 593 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 BCL2L10Q9HD36 194 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 PNO1Q9NRX1 252 aaKnown RBP12.37□□□□□ -0.43
MCF2L-213ENST00000421756 ZSCAN32Q9NX65 697 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 EXTL2Q9UBQ6 330 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 TESQ9UGI8 421 aaKnown RBP12.37□□□□□ -0.43
MCF2L-213ENST00000421756 CBLCQ9ULV8 474 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 LIPT1Q9Y234 373 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 GPR179Q6PRD1 2367 aa12.37□□□□□ -0.43
MCF2L-213ENST00000421756 A0A087WV48 116 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 HTR3EA5X5Y0 456 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 BMP8BP34820 402 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 OR1D4P47884 311 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 ATAD3CQ5T2N8 411 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 TUBA3EQ6PEY2 450 aa12.36□□□□□ -0.43
MCF2L-213ENST00000421756 BMP8AQ7Z5Y6 402 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms