RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 RBBP4Q09028 425 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 CYP51A1Q16850 503 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 LIN52Q52LA3 116 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 C3P1Q6ZMU1 363 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 KRT73Q86Y46 540 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 POU5F2Q8N7G0 328 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 OR8J3Q8NGG0 315 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 GPR119Q8TDV5 335 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 SSC4DQ8WTU2 575 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 PHF10Q8WUB8 498 aaKnown RBP20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 ARSGQ96EG1 525 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 WDYHV1Q96HA8 205 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 LRRC37BQ96QE4 947 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 KAT8Q9H7Z6 458 aaKnown RBP20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 DSPPQ9NZW4 1301 aa20.91■□□□□ 0.94
SMARCB1-205ENST00000417137 PTPN13Q12923 2485 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 OR2M5A3KFT3 312 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 C7orf72A4D263 438 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 OIP5O43482 229 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 SHOX2O60902 331 aaPredicted RBP20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 PGM3O95394 542 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 NID1P14543 1247 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 ETS2P15036 469 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 PRDX6P30041 224 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 CCR4P51679 360 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 SKP2Q13309 424 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 SCARB2Q14108 478 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 PLPPR5Q32ZL2 321 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 NDUFAF6Q330K2 333 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 HMGN2P46Q86SG4 172 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 SERPINA11Q86U17 422 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 ULK2Q8IYT8 1036 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 GTPBP8Q8N3Z3 284 aaPredicted RBP20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 ANKS4BQ8N8V4 417 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 C11orf65Q8NCR3 313 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 NFKBIDQ8NI38 313 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 RCN3Q96D15 328 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 ECSITQ9BQ95 431 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 SPATA5L1Q9BVQ7 753 aa20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 EXOSC3Q9NQT5 275 aaKnown RBP20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 GPC6Q9Y625 555 aaPredicted RBP20.9■□□□□ 0.94
SMARCB1-205ENST00000417137 AIM2O14862 343 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 THBS1P07996 1170 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 PGCP20142 388 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 POU3F2P20265 443 aaPredicted RBP20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 ADH6P28332 368 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 SLC6A8P48029 635 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 STARP49675 285 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 SMSP52788 366 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 EEFSECP57772 596 aaKnown RBP20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 ART3Q13508 389 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 TMEM44Q2T9K0 475 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 RPS26P11Q5JNZ5 115 aaPredicted RBP20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 C1orf185Q5T7R7 199 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 B3GNT6Q6ZMB0 384 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 TREML1Q86YW5 311 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 SLC30A8Q8IWU4 369 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 C10orf111Q8N326 155 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 HIPK4Q8NE63 616 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 FAM71CQ8NEG0 241 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 TMEM234Q8WY98 164 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 ZNF607Q96SK3 696 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 SPATA9Q9BWV2 254 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 PRDM4Q9UKN5 801 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 ANGPT4Q9Y264 503 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 AP3M1Q9Y2T2 418 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 ZNF337Q9Y3M9 751 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 AP4B1Q9Y6B7 739 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 ZNF407Q9C0G0 2248 aa20.89■□□□□ 0.93
SMARCB1-205ENST00000417137 NCKAP5O14513 1909 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 WIPF3A6NGB9 483 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 LDLRP01130 860 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 LINGO3P0C6S8 592 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 LHX2P50458 406 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 SRYQ05066 204 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 SELPLGQ14242 412 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 ADRM1Q16186 407 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 ZNF311Q5JNZ3 666 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 DCST1Q5T197 706 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 RPTNQ6XPR3 784 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 CHMP1BQ7LBR1 199 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 ARPINQ7Z6K5 226 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 ZNF440Q8IYI8 595 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 MEIOBQ8N635 442 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 OR5M1Q8NGP8 315 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 OR10A6Q8NH74 314 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 ZPLD1Q8TCW7 415 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 CCDC120Q96HB5 630 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 DMRTA2Q96SC8 542 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 SLC39A3Q9BRY0 314 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 TRIM8Q9BZR9 551 aa20.88■□□□□ 0.93
SMARCB1-205ENST00000417137 H0Y3Z8 333 aa20.87■□□□□ 0.93
SMARCB1-205ENST00000417137 FXYD1O00168 92 aa20.87■□□□□ 0.93
SMARCB1-205ENST00000417137 DNAJA2O60884 412 aa20.87■□□□□ 0.93
SMARCB1-205ENST00000417137 SERPINB7O75635 380 aa20.87■□□□□ 0.93
SMARCB1-205ENST00000417137 UQCRBP14927 111 aa20.87■□□□□ 0.93
SMARCB1-205ENST00000417137 ZNF708P17019 499 aa20.87■□□□□ 0.93
SMARCB1-205ENST00000417137 ME2P23368 584 aa20.87■□□□□ 0.93
SMARCB1-205ENST00000417137 MRPL2Q5T653 305 aaKnown RBP20.87■□□□□ 0.93
SMARCB1-205ENST00000417137 NET1Q7Z628 596 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms