RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ISL2Q96A47 359 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 ZNF700Q9H0M5 742 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 AGPAT4Q9NRZ5 378 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 TNRC6CQ9HCJ0 1690 aaKnown RBP16.16■□□□□ 0.18
PHRF1-202ENST00000413872 MAP2K3P46734 347 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 CSNK1G2P78368 415 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 PAPD4Q6PIY7 484 aaKnown RBP16.16■□□□□ 0.18
PHRF1-202ENST00000413872 TREX2Q9BQ50 279 aaPredicted RBP16.16■□□□□ 0.18
PHRF1-202ENST00000413872 C19orf43Q9BQ61 176 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 CPPED1Q9BRF8 314 aaPredicted RBP16.16■□□□□ 0.18
PHRF1-202ENST00000413872 NGBQ9NPG2 151 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 ZNF224Q9NZL3 707 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 TAF1P21675 1872 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 ANKRD30BLA7E2S9 258 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 FURINP09958 794 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 ERV3-1Q14264 604 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 CMPK2Q5EBM0 449 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 CCNJQ5T5M9 372 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 PLAG1Q6DJT9 500 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 BOLLQ8N9W6 283 aaKnown RBP16.16■□□□□ 0.18
PHRF1-202ENST00000413872 OR1J4Q8NGS1 313 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 KLHL13Q9P2N7 655 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 TCRBV3S1A0A5B6 114 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 RRP8O43159 456 aaKnown RBP16.16■□□□□ 0.18
PHRF1-202ENST00000413872 SYCE2Q6PIF2 218 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 DNAAF1Q8NEP3 725 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 SAP130Q9H0E3 1048 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 FGF22Q9HCT0 170 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 CD93Q9NPY3 652 aa16.16■□□□□ 0.18
PHRF1-202ENST00000413872 HEMK1Q9Y5R4 338 aaPredicted RBP16.16■□□□□ 0.18
PHRF1-202ENST00000413872 A0A1B0GX78 115 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 C17orf67Q0P5P2 114 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 MAP4K2Q12851 820 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 CDK5R2Q13319 367 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 PGM2L1Q6PCE3 622 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 VRK2Q86Y07 508 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 TMEM178AQ8NBL3 297 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ZNF587Q96SQ5 575 aaPredicted RBP16.15■□□□□ 0.18
PHRF1-202ENST00000413872 P2RY12Q9H244 342 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 CNOT2Q9NZN8 540 aaKnown RBP16.15■□□□□ 0.18
PHRF1-202ENST00000413872 PCDHGA6Q9Y5G7 932 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 WIF1Q9Y5W5 379 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 CSNK1G3Q9Y6M4 447 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 LAMB1P07942 1786 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 SLC5A10A0PJK1 596 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ALDOCP09972 364 aaKnown RBP16.15■□□□□ 0.18
PHRF1-202ENST00000413872 LHCGRP22888 699 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ERP29P30040 261 aaKnown RBP16.15■□□□□ 0.18
PHRF1-202ENST00000413872 LCN1P31025 176 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 POLR2HP52434 150 aaKnown RBP16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ERVK-25P63136 954 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ACVR1Q04771 509 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 SNTB2Q13425 540 aaKnown RBP16.15■□□□□ 0.18
PHRF1-202ENST00000413872 EXT1Q16394 746 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 TMEM236Q5W0B7 351 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 CDC6Q99741 560 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 NELFAQ9H3P2 528 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 LYRM4Q9HD34 91 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 MAT1AQ00266 395 aaKnown RBP16.15■□□□□ 0.18
PHRF1-202ENST00000413872 PYCR3Q53H96 274 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 MRPL2Q5T653 305 aaKnown RBP16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ABHD17CQ6PCB6 329 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 PODNL1Q6PEZ8 512 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 SPEM1Q8N4L4 309 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 KIAA1958Q8N8K9 716 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 OR51L1Q8NGJ5 315 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 SLC37A2Q8TED4 501 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 PDXPQ96GD0 296 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 SYT3Q9BQG1 590 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ZDHHC5Q9C0B5 715 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 LIN28AQ9H9Z2 209 aaKnown RBP16.15■□□□□ 0.18
PHRF1-202ENST00000413872 PCDHGA3Q9Y5H0 932 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 BORCS7-ASMTA0A0B4J1R7 106 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ITGAMP11215 1152 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 PGGHGQ32M88 737 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ZFP41Q8N8Y5 198 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 SDR9C7Q8NEX9 313 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ASB17Q8WXJ9 295 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 ABRACLQ9P1F3 81 aa16.15■□□□□ 0.18
PHRF1-202ENST00000413872 HCRTR1O43613 425 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 FCER2P06734 321 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 CD83Q01151 205 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 PDE7AQ13946 482 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 CNN3Q15417 329 aaKnown RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 ULBP2Q9BZM5 246 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 URB1O60287 2271 aaKnown RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 GON4LQ3T8J9 2241 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 DDX60LQ5H9U9 1706 aaKnown RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 SERINC4A6NH21 518 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 SLC43A1O75387 559 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 PIP5KL1Q5T9C9 394 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 SYT14Q8NB59 555 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 SLC6A7Q99884 636 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 FUNDC2Q9BWH2 189 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 C6orf106Q9H6K1 298 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 ATP13A2Q9NQ11 1180 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 CARD8Q9Y2G2 431 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 F5H5K5 113 aa16.14■□□□□ 0.17
PHRF1-202ENST00000413872 SLC33A1O00400 549 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-202ENST00000413872 SYT5O00445 386 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms